RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 LINS1Q8NG48 757 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
LIMS2-217ENST00000545738 SPON1Q9HCB6 807 aa20.7■□□□□ 0.9
LIMS2-217ENST00000545738 TNRC6CQ9HCJ0 1690 aaKnown RBP20.69■□□□□ 0.9
LIMS2-217ENST00000545738 PRR5LQ6MZQ0 368 aa20.69■□□□□ 0.9
LIMS2-217ENST00000545738 PANK1Q8TE04 598 aa20.69■□□□□ 0.9
LIMS2-217ENST00000545738 RTL5Q5HYW3 569 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-217ENST00000545738 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
LIMS2-217ENST00000545738 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
LIMS2-217ENST00000545738 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
LIMS2-217ENST00000545738 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 PARP3Q9Y6F1 533 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 NEXNQ0ZGT2 675 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 GCKRQ14397 625 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 NBPF5PQ86XG9 351 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-217ENST00000545738 CCDC191Q8NCU4 936 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
LIMS2-217ENST00000545738 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
LIMS2-217ENST00000545738 SRCIN1Q9C0H9 1055 aa20.66■□□□□ 0.9
LIMS2-217ENST00000545738 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
LIMS2-217ENST00000545738 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
LIMS2-217ENST00000545738 LRP5O75197 1615 aa20.66■□□□□ 0.9
LIMS2-217ENST00000545738 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
LIMS2-217ENST00000545738 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
LIMS2-217ENST00000545738 CASP7P55210 303 aa20.65■□□□□ 0.9
LIMS2-217ENST00000545738 INTS3Q68E01 1043 aaKnown RBP20.65■□□□□ 0.9
LIMS2-217ENST00000545738 DZIP1LQ8IYY4 767 aaKnown RBP20.65■□□□□ 0.9
LIMS2-217ENST00000545738 KIAA1551Q9HCM1 1747 aa20.65■□□□□ 0.9
LIMS2-217ENST00000545738 POLD1P28340 1107 aa20.64■□□□□ 0.9
LIMS2-217ENST00000545738 C3orf67Q6ZVT6 689 aa20.64■□□□□ 0.9
LIMS2-217ENST00000545738 CNBD1Q8NA66 436 aa20.64■□□□□ 0.9
LIMS2-217ENST00000545738 UTP14AQ9BVJ6 771 aaKnown RBP20.64■□□□□ 0.9
LIMS2-217ENST00000545738 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.9
LIMS2-217ENST00000545738 LAMB2P55268 1798 aa20.64■□□□□ 0.89
LIMS2-217ENST00000545738 COL11A2P13942 1736 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-217ENST00000545738 NBPF7P0C2Y1 421 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-217ENST00000545738 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
LIMS2-217ENST00000545738 USP44Q9H0E7 712 aa20.63■□□□□ 0.89
LIMS2-217ENST00000545738 H7C1W4 665 aa20.62■□□□□ 0.89
LIMS2-217ENST00000545738 ALDH1L1O75891 902 aa20.62■□□□□ 0.89
LIMS2-217ENST00000545738 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
LIMS2-217ENST00000545738 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
LIMS2-217ENST00000545738 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-217ENST00000545738 HCLS1P14317 486 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-217ENST00000545738 CCT4P50991 539 aaKnown RBP20.61■□□□□ 0.89
LIMS2-217ENST00000545738 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
LIMS2-217ENST00000545738 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
LIMS2-217ENST00000545738 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
LIMS2-217ENST00000545738 COL4A1P02462 1669 aa20.61■□□□□ 0.89
LIMS2-217ENST00000545738 MEIS3Q99687 375 aa20.61■□□□□ 0.89
LIMS2-217ENST00000545738 GRM8O00222 908 aa20.6■□□□□ 0.89
LIMS2-217ENST00000545738 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
LIMS2-217ENST00000545738 NYXQ9GZU5 481 aa20.6■□□□□ 0.89
LIMS2-217ENST00000545738 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
LIMS2-217ENST00000545738 UTYO14607 1347 aa20.59■□□□□ 0.89
LIMS2-217ENST00000545738 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
LIMS2-217ENST00000545738 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.88
LIMS2-217ENST00000545738 PDE3AQ14432 1141 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 SLC10A5Q5PT55 438 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.88
LIMS2-217ENST00000545738 TAF1P21675 1872 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 MYH3P11055 1940 aa20.58■□□□□ 0.88
LIMS2-217ENST00000545738 RIC1Q4ADV7 1423 aa20.57■□□□□ 0.88
LIMS2-217ENST00000545738 SUCLG2Q96I99 432 aa20.57■□□□□ 0.88
LIMS2-217ENST00000545738 PPP1R1BQ9UD71 204 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-217ENST00000545738 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
LIMS2-217ENST00000545738 NPHP1O15259 732 aa20.56■□□□□ 0.88
LIMS2-217ENST00000545738 GTF2E1P29083 439 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-217ENST00000545738 ST5P78524 1137 aa20.56■□□□□ 0.88
LIMS2-217ENST00000545738 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
LIMS2-217ENST00000545738 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
LIMS2-217ENST00000545738 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-217ENST00000545738 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-217ENST00000545738 ZBTB7BO15156 539 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-217ENST00000545738 CHRNA5P30532 468 aa20.56■□□□□ 0.88
LIMS2-217ENST00000545738 BRIP1Q9BX63 1249 aa20.56■□□□□ 0.88
LIMS2-217ENST00000545738 DLEC1Q9Y238 1755 aa20.55■□□□□ 0.88
LIMS2-217ENST00000545738 KLRG2A4D1S0 409 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-217ENST00000545738 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
LIMS2-217ENST00000545738 KCNA3P22001 575 aa20.54■□□□□ 0.88
LIMS2-217ENST00000545738 FOXO4P98177 505 aa20.54■□□□□ 0.88
LIMS2-217ENST00000545738 SLC51AQ86UW1 340 aa20.54■□□□□ 0.88
LIMS2-217ENST00000545738 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-217ENST00000545738 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
LIMS2-217ENST00000545738 A0A0G2JLW4 131 aa20.53■□□□□ 0.88
LIMS2-217ENST00000545738 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-217ENST00000545738 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
LIMS2-217ENST00000545738 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
LIMS2-217ENST00000545738 DPEP1P16444 411 aa20.52■□□□□ 0.88
LIMS2-217ENST00000545738 ANKRD44Q8N8A2 993 aa20.52■□□□□ 0.88
LIMS2-217ENST00000545738 CRBNQ96SW2 442 aa20.52■□□□□ 0.88
LIMS2-217ENST00000545738 SYT17Q9BSW7 474 aa20.52■□□□□ 0.88
LIMS2-217ENST00000545738 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
LIMS2-217ENST00000545738 CACNA1SQ13698 1873 aa20.52■□□□□ 0.87
LIMS2-217ENST00000545738 PDE8AO60658 829 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms