RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 RASSF10A6NK89 507 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 SIAH2O43255 324 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 BMP1P13497 986 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZNF511Q8NB15 262 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 NLRP7Q8WX94 980 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZFP42Q96MM3 310 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 PHOX2BQ99453 314 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 PRDM11Q9NQV5 511 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 FAM217BQ9NTX9 383 aaPredicted RBP3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 BCS1LQ9Y276 419 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 THRAP3Q9Y2W1 955 aaKnown RBP3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 CASP8AP2Q9UKL3 1982 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 PNPLA7Q6ZV29 1317 aa3.65□□□□□ -1.83
TRAV1-1-201ENST00000542354 ARHGEF10O15013 1369 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 BRD4O60885 1362 aaPredicted RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 UNC80Q8N2C7 3258 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 NRAPQ86VF7 1730 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 TTC28Q96AY4 2481 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 CCDC144AA2RUR9 1427 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 GLTPD2A6NH11 291 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 CTHP32929 405 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 ECE1P42892 770 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 WDR4P57081 412 aaKnown RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 SH3BP2P78314 561 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 PLCB2Q00722 1185 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 MAP3K12Q12852 859 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 AGERQ15109 404 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 TRIM46Q7Z4K8 759 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 BPHLQ86WA6 291 aaPredicted RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 GPR101Q96P66 508 aaPredicted RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 P2RX7Q99572 595 aaKnown RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 RNF181Q9P0P0 153 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 VIRMAQ69YN4 1812 aaKnown RBP3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 TOPAZ1Q8N9V7 1692 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 BAHCC1Q9P281 2608 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 ERBB4Q15303 1308 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 COL24A1Q17RW2 1714 aa3.64□□□□□ -1.83
TRAV1-1-201ENST00000542354 HFM1A2PYH4 1435 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TECPR2O15040 1411 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 CEP290O15078 2479 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TNRC6CQ9HCJ0 1690 aaKnown RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 IGHA1P01876 353 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TSPY4P0CV99 314 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TSPY10P0CW01 314 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 MAP2K2P36507 400 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 FOXK2Q01167 660 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 KCNMA1Q12791 1236 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TTLL12Q14166 644 aaPredicted RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 DDB1Q16531 1140 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TMEM151AQ8N4L1 468 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 BAP1Q92560 729 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 CCDC102AQ96A19 550 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TSEN34Q9BSV6 310 aaKnown RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 HIRIP3Q9BW71 556 aaPredicted RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 CDV3Q9UKY7 258 aaKnown RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 STXBP5LQ9Y2K9 1186 aa3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 COL14A1Q05707 1796 aaKnown RBP3.63□□□□□ -1.83
TRAV1-1-201ENST00000542354 TNS3Q68CZ2 1445 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 CDC42BPAQ5VT25 1732 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 TMEM265A0A087WTH1 108 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 BMP2P12643 396 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 MSL1Q68DK7 614 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 PRR7Q8TB68 274 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 SYMPKQ92797 1274 aaKnown RBP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 GPKOWQ92917 476 aaPredicted RBP eCLIP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 CDK15Q96Q40 435 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 PURBQ96QR8 312 aaKnown RBP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZBTB3Q9H5J0 574 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 ABT1Q9ULW3 272 aaKnown RBP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 EMILIN1Q9Y6C2 1016 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 PASKQ96RG2 1323 aa3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZC3H4Q9UPT8 1303 aaKnown RBP3.62□□□□□ -1.83
TRAV1-1-201ENST00000542354 NALCNQ8IZF0 1738 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 VCANP13611 3396 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZIC2O95409 532 aaPredicted RBP3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 TIMP2P16035 220 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 SSTR3P32745 418 aaPredicted RBP3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 ARID5BQ14865 1188 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 LINC01559Q495D7 138 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 SLC27A3Q5K4L6 730 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 KANK3Q6NY19 840 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 ALYREFQ86V81 257 aaKnown RBP3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 PNMA1Q8ND90 353 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 CAPNS2Q96L46 248 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 LRRC4BQ9NT99 713 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 PGPEP1Q9NXJ5 209 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 TLL2Q9Y6L7 1015 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 ZNF644Q9H582 1327 aaPredicted RBP3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 SBNO1A3KN83 1393 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 BCL9O00512 1426 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 SSH2Q76I76 1423 aa3.61□□□□□ -1.83
TRAV1-1-201ENST00000542354 PRXQ9BXM0 1461 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 MBD5Q9P267 1494 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 DUOX2Q9NRD8 1548 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 PHRF1Q9P1Y6 1649 aaKnown RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 GDF11O95390 407 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 TGFB2P61812 414 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 GRM1Q13255 1194 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms