RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 STK31Q9BXU1 1019 aa21.39■■□□□ 1.01
UBC-208ENST00000540700 BCAR3O75815 825 aa21.38■■□□□ 1.01
UBC-208ENST00000540700 ALDH1L2Q3SY69 923 aa21.38■■□□□ 1.01
UBC-208ENST00000540700 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
UBC-208ENST00000540700 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 A0A087WZG4 1122 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 C21orf2O43822 256 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 CCDC24Q8N4L8 307 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
UBC-208ENST00000540700 AFDNP55196 1824 aaKnown RBP21.36■■□□□ 1.01
UBC-208ENST00000540700 FLIIQ13045 1269 aa21.36■■□□□ 1.01
UBC-208ENST00000540700 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
UBC-208ENST00000540700 CHADLQ6NUI6 762 aa21.35■■□□□ 1.01
UBC-208ENST00000540700 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
UBC-208ENST00000540700 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
UBC-208ENST00000540700 POTEJP0CG39 1038 aa21.34■■□□□ 1.01
UBC-208ENST00000540700 CHMP4AQ9BY43 222 aa21.34■■□□□ 1.01
UBC-208ENST00000540700 CREBZFQ9NS37 354 aa21.34■■□□□ 1.01
UBC-208ENST00000540700 NRXN2Q9P2S2 1712 aa21.33■■□□□ 1.01
UBC-208ENST00000540700 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
UBC-208ENST00000540700 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
UBC-208ENST00000540700 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1.01
UBC-208ENST00000540700 KIF6Q6ZMV9 814 aa21.33■■□□□ 1.01
UBC-208ENST00000540700 DDNO94850 711 aaPredicted RBP21.32■■□□□ 1
UBC-208ENST00000540700 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
UBC-208ENST00000540700 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
UBC-208ENST00000540700 TNNQ9UQP3 1299 aa21.32■■□□□ 1
UBC-208ENST00000540700 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
UBC-208ENST00000540700 PI4KAP2A4QPH2 592 aa21.31■■□□□ 1
UBC-208ENST00000540700 PDE6BP35913 854 aa21.31■■□□□ 1
UBC-208ENST00000540700 NPM2Q86SE8 214 aaKnown RBP21.31■■□□□ 1
UBC-208ENST00000540700 PI4KAP1Q8N8J0 262 aa21.31■■□□□ 1
UBC-208ENST00000540700 BRIP1Q9BX63 1249 aa21.31■■□□□ 1
UBC-208ENST00000540700 TAOK3Q9H2K8 898 aa21.31■■□□□ 1
UBC-208ENST00000540700 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
UBC-208ENST00000540700 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
UBC-208ENST00000540700 F6X3S4 739 aa21.3■■□□□ 1
UBC-208ENST00000540700 FOXN1O15353 648 aa21.3■■□□□ 1
UBC-208ENST00000540700 FKBP5Q13451 457 aaPredicted RBP21.3■■□□□ 1
UBC-208ENST00000540700 PRR5LQ6MZQ0 368 aa21.3■■□□□ 1
UBC-208ENST00000540700 GIGYF2Q6Y7W6 1299 aaKnown RBP21.3■■□□□ 1
UBC-208ENST00000540700 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
UBC-208ENST00000540700 CCDC88AQ3V6T2 1871 aa21.3■■□□□ 1
UBC-208ENST00000540700 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
UBC-208ENST00000540700 NUP98P52948 1817 aa21.29■■□□□ 1
UBC-208ENST00000540700 NPHP1O15259 732 aa21.29■■□□□ 1
UBC-208ENST00000540700 KSR2Q6VAB6 950 aa21.29■■□□□ 1
UBC-208ENST00000540700 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
UBC-208ENST00000540700 CACNA1FO60840 1977 aa21.28■■□□□ 1
UBC-208ENST00000540700 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
UBC-208ENST00000540700 RIC3Q7Z5B4 369 aa21.28■■□□□ 1
UBC-208ENST00000540700 RGL2O15211 777 aa21.27■■□□□ 1
UBC-208ENST00000540700 GPTP24298 496 aa21.27■■□□□ 1
UBC-208ENST00000540700 ZNF34Q8IZ26 560 aa21.27■■□□□ 1
UBC-208ENST00000540700 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
UBC-208ENST00000540700 ATP5J2-PTCD1G3V325 749 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 TCIRG1Q13488 830 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 MYD88Q99836 296 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 ISCA1Q9BUE6 129 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 METTL22Q9BUU2 404 aaPredicted RBP21.26■□□□□ 0.99
UBC-208ENST00000540700 PTPRCP08575 1304 aa21.26■□□□□ 0.99
UBC-208ENST00000540700 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 CNTNAP1P78357 1384 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 DDX58O95786 925 aaKnown RBP21.25■□□□□ 0.99
UBC-208ENST00000540700 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
UBC-208ENST00000540700 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 DNAAF4Q8WXU2 420 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 LTBP3Q9NS15 1303 aa21.25■□□□□ 0.99
UBC-208ENST00000540700 CNKSR1Q969H4 720 aa21.24■□□□□ 0.99
UBC-208ENST00000540700 SETDB2Q96T68 719 aa21.24■□□□□ 0.99
UBC-208ENST00000540700 NIP7Q9Y221 180 aaKnown RBP eCLIP21.24■□□□□ 0.99
UBC-208ENST00000540700 ZNF652Q9Y2D9 606 aa21.24■□□□□ 0.99
UBC-208ENST00000540700 KIF16BQ96L93 1317 aa21.24■□□□□ 0.99
UBC-208ENST00000540700 TRIM27P14373 513 aa21.23■□□□□ 0.99
UBC-208ENST00000540700 VEGFBP49765 207 aa21.23■□□□□ 0.99
UBC-208ENST00000540700 SUSD4Q5VX71 490 aa21.23■□□□□ 0.99
UBC-208ENST00000540700 LDHDQ86WU2 507 aa21.23■□□□□ 0.99
UBC-208ENST00000540700 FRAT1Q92837 279 aaPredicted RBP21.23■□□□□ 0.99
UBC-208ENST00000540700 ANKRD31Q8N7Z5 1873 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 PLIN1O60240 522 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 ST5P78524 1137 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 CWF19L2Q2TBE0 894 aaKnown RBP21.22■□□□□ 0.99
UBC-208ENST00000540700 EAPPQ56P03 285 aaPredicted RBP21.22■□□□□ 0.99
UBC-208ENST00000540700 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 NLRP10Q86W26 655 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 TAF1DQ9H5J8 278 aaPredicted RBP21.22■□□□□ 0.99
UBC-208ENST00000540700 PRDM10Q9NQV6 1147 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
UBC-208ENST00000540700 FAM177BA6PVY3 158 aa21.21■□□□□ 0.99
UBC-208ENST00000540700 SRGNP10124 158 aa21.21■□□□□ 0.99
UBC-208ENST00000540700 CTCFP49711 727 aaPredicted RBP21.21■□□□□ 0.99
UBC-208ENST00000540700 HSP90AB3PQ58FF7 597 aa21.21■□□□□ 0.99
UBC-208ENST00000540700 ARHGAP45Q92619 1136 aa21.21■□□□□ 0.99
UBC-208ENST00000540700 COL11A2P13942 1736 aaPredicted RBP21.21■□□□□ 0.99
UBC-208ENST00000540700 TMEM88BA6NKF7 163 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms