RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
PRKAB1-205ENST00000540121 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
PRKAB1-205ENST00000540121 HMG20BQ9P0W2 317 aa16.29■□□□□ 0.2
PRKAB1-205ENST00000540121 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
PRKAB1-205ENST00000540121 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
PRKAB1-205ENST00000540121 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 TERF1P54274 439 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 GCKRQ14397 625 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 KAZALD1Q96I82 304 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
PRKAB1-205ENST00000540121 SASH1O94885 1247 aa16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 AK2P54819 239 aa16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 RUFY3Q7L099 469 aa16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 IL25Q9H293 177 aa16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.19
PRKAB1-205ENST00000540121 CCDC171Q6TFL3 1326 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 AACSQ86V21 672 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 SUCLG2Q96I99 432 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
PRKAB1-205ENST00000540121 STX6O43752 255 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 ATP5JP18859 108 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 PDCP20941 246 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 KRT32Q14532 448 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 SMC3Q9UQE7 1217 aa16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
PRKAB1-205ENST00000540121 UBE2HP62256 183 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 QTRT2Q9H974 415 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 COL18A1P39060 1754 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 RBSNQ9H1K0 784 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-205ENST00000540121 ZBTB7CA1YPR0 619 aa16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 ANXA1P04083 346 aa16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 CASTP20810 708 aaKnown RBP16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 ARXQ96QS3 562 aa16.23■□□□□ 0.19
PRKAB1-205ENST00000540121 SYT1P21579 422 aa16.22■□□□□ 0.19
PRKAB1-205ENST00000540121 TSPY26PQ9H489 355 aa16.22■□□□□ 0.19
PRKAB1-205ENST00000540121 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
PRKAB1-205ENST00000540121 NLRP2Q9NX02 1062 aa16.22■□□□□ 0.19
PRKAB1-205ENST00000540121 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
PRKAB1-205ENST00000540121 PKD1L3Q7Z443 1732 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 ZNF500O60304 480 aaPredicted RBP16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 F13A1P00488 732 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 CCDC183Q5T5S1 534 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 MED23Q9ULK4 1368 aa16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 PARP4Q9UKK3 1724 aaKnown RBP16.21■□□□□ 0.19
PRKAB1-205ENST00000540121 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 PTH1RQ03431 593 aa16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 USP48Q86UV5 1035 aa16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 C8orf37Q96NL8 207 aa16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.18
PRKAB1-205ENST00000540121 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 JAKMIP1Q96N16 626 aaKnown RBP16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
PRKAB1-205ENST00000540121 ELP1O95163 1332 aa16.19■□□□□ 0.18
PRKAB1-205ENST00000540121 SYCE3A1L190 88 aa16.19■□□□□ 0.18
PRKAB1-205ENST00000540121 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
PRKAB1-205ENST00000540121 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
PRKAB1-205ENST00000540121 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
PRKAB1-205ENST00000540121 SLC27A2O14975 620 aa16.18■□□□□ 0.18
PRKAB1-205ENST00000540121 HMGB1P09429 215 aaKnown RBP16.18■□□□□ 0.18
PRKAB1-205ENST00000540121 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
PRKAB1-205ENST00000540121 MEGF6O75095 1541 aa16.18■□□□□ 0.18
PRKAB1-205ENST00000540121 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms