RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NUTM1Q86Y26 1132 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 NUP188Q5SRE5 1749 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.84
GNE-205ENST00000539815 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
GNE-205ENST00000539815 CHMP3Q9Y3E7 222 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 AKAP12Q02952 1782 aa9.77□□□□□ -0.84
GNE-205ENST00000539815 SOX10P56693 466 aa9.77□□□□□ -0.84
GNE-205ENST00000539815 SLC4A8Q2Y0W8 1093 aa9.77□□□□□ -0.84
GNE-205ENST00000539815 NFKBIEO00221 500 aa9.77□□□□□ -0.85
GNE-205ENST00000539815 MYO1BO43795 1136 aa9.77□□□□□ -0.85
GNE-205ENST00000539815 TM4SF1P30408 202 aa9.77□□□□□ -0.85
GNE-205ENST00000539815 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
GNE-205ENST00000539815 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 GBA2Q9HCG7 927 aaPredicted RBP9.76□□□□□ -0.85
GNE-205ENST00000539815 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 SRGNP10124 158 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
GNE-205ENST00000539815 KIF22Q14807 665 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
GNE-205ENST00000539815 DDX58O95786 925 aaKnown RBP9.76□□□□□ -0.85
GNE-205ENST00000539815 INTS5Q6P9B9 1019 aaKnown RBP9.76□□□□□ -0.85
GNE-205ENST00000539815 PRKG1Q13976 671 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 GLIPR1L2Q4G1C9 344 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 ARHGEF28Q8N1W1 1705 aaKnown RBP9.75□□□□□ -0.85
GNE-205ENST00000539815 BBOX1O75936 387 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 ARMC9Q7Z3E5 817 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 CNOT7Q9UIV1 285 aaKnown RBP9.75□□□□□ -0.85
GNE-205ENST00000539815 TBC1D10BQ4KMP7 808 aaPredicted RBP9.75□□□□□ -0.85
GNE-205ENST00000539815 AMIGO3Q86WK7 504 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 GLIS2Q9BZE0 524 aaPredicted RBP9.75□□□□□ -0.85
GNE-205ENST00000539815 CWC22Q9HCG8 908 aaKnown RBP9.75□□□□□ -0.85
GNE-205ENST00000539815 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
GNE-205ENST00000539815 EPS15P42566 896 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 MCM10Q7L590 875 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 ABCA3Q99758 1704 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 CNTNAP1P78357 1384 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 POTEIP0CG38 1075 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
GNE-205ENST00000539815 STK31Q9BXU1 1019 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 AOC3Q16853 763 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 TMOD2Q9NZR1 351 aa9.74□□□□□ -0.85
GNE-205ENST00000539815 C10orf71Q711Q0 1435 aa9.73□□□□□ -0.85
GNE-205ENST00000539815 TMC4Q7Z404 712 aa9.73□□□□□ -0.85
GNE-205ENST00000539815 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
GNE-205ENST00000539815 PPP1R12BO60237 982 aaPredicted RBP9.73□□□□□ -0.85
GNE-205ENST00000539815 CCAR1Q8IX12 1150 aaKnown RBP9.73□□□□□ -0.85
GNE-205ENST00000539815 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
GNE-205ENST00000539815 USP16Q9Y5T5 823 aa9.73□□□□□ -0.85
GNE-205ENST00000539815 HSPA8P11142 646 aaKnown RBP9.72□□□□□ -0.85
GNE-205ENST00000539815 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
GNE-205ENST00000539815 RGMBQ6NW40 437 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 VPS37DQ86XT2 251 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 BTAF1O14981 1849 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
GNE-205ENST00000539815 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
GNE-205ENST00000539815 ZNF428Q96B54 188 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 ADCY9O60503 1353 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 HEG1Q9ULI3 1381 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 SH3TC1Q8TE82 1336 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
GNE-205ENST00000539815 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
GNE-205ENST00000539815 AOC2O75106 756 aa9.71□□□□□ -0.85
GNE-205ENST00000539815 MICALL2Q8IY33 904 aa9.71□□□□□ -0.85
GNE-205ENST00000539815 NFAT5O94916 1531 aa9.71□□□□□ -0.85
GNE-205ENST00000539815 TRAF5O00463 557 aa9.71□□□□□ -0.86
GNE-205ENST00000539815 SREBF2Q12772 1141 aa9.71□□□□□ -0.86
GNE-205ENST00000539815 RREB1Q92766 1687 aa9.71□□□□□ -0.86
GNE-205ENST00000539815 CICQ96RK0 1608 aaPredicted RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 EP400Q96L91 3159 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 LTBP3Q9NS15 1303 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 UFL1O94874 794 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 KCNA3P22001 575 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 IL13P35225 146 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 IGHMBP2P38935 993 aaKnown RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 NBPF11Q86T75 865 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
GNE-205ENST00000539815 DBNDD1Q9H9R9 158 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 GGA1Q9UJY5 639 aa9.7□□□□□ -0.86
GNE-205ENST00000539815 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
GNE-205ENST00000539815 NBR1Q14596 966 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 RASSF10A6NK89 507 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms