RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 RBCK1Q9BYM8 510 aa11.36□□□□□ -0.59
TRAV11-201ENST00000539512 DCDC2BA2VCK2 349 aa11.35□□□□□ -0.59
TRAV11-201ENST00000539512 PDGFAP04085 211 aa11.35□□□□□ -0.59
TRAV11-201ENST00000539512 INPP5BP32019 993 aa11.35□□□□□ -0.59
TRAV11-201ENST00000539512 ASB16Q96NS5 453 aa11.35□□□□□ -0.59
TRAV11-201ENST00000539512 DMGDHQ9UI17 866 aaKnown RBP11.35□□□□□ -0.59
TRAV11-201ENST00000539512 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
TRAV11-201ENST00000539512 ANKRD33BA6NCL7 494 aa11.34□□□□□ -0.59
TRAV11-201ENST00000539512 FAM157BP0CG42 384 aa11.34□□□□□ -0.59
TRAV11-201ENST00000539512 DBN1Q16643 649 aa11.34□□□□□ -0.59
TRAV11-201ENST00000539512 DMRTB1Q96MA1 342 aa11.34□□□□□ -0.59
TRAV11-201ENST00000539512 OPLAHO14841 1288 aa11.33□□□□□ -0.6
TRAV11-201ENST00000539512 PPFIA3O75145 1194 aa11.33□□□□□ -0.6
TRAV11-201ENST00000539512 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
TRAV11-201ENST00000539512 ZNF837Q96EG3 531 aaPredicted RBP11.33□□□□□ -0.6
TRAV11-201ENST00000539512 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
TRAV11-201ENST00000539512 UBAP1LF5GYI3 381 aa11.32□□□□□ -0.6
TRAV11-201ENST00000539512 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
TRAV11-201ENST00000539512 TMC7Q7Z402 723 aa11.32□□□□□ -0.6
TRAV11-201ENST00000539512 NEFLP07196 543 aa11.31□□□□□ -0.6
TRAV11-201ENST00000539512 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
TRAV11-201ENST00000539512 BCL11AQ9H165 835 aa11.31□□□□□ -0.6
TRAV11-201ENST00000539512 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
TRAV11-201ENST00000539512 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
TRAV11-201ENST00000539512 LCE2BO14633 110 aa11.3□□□□□ -0.6
TRAV11-201ENST00000539512 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
TRAV11-201ENST00000539512 DNAJC14Q6Y2X3 702 aaPredicted RBP11.3□□□□□ -0.6
TRAV11-201ENST00000539512 GJD3Q8N144 294 aa11.3□□□□□ -0.6
TRAV11-201ENST00000539512 PNMA5Q96PV4 448 aa11.3□□□□□ -0.6
TRAV11-201ENST00000539512 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
TRAV11-201ENST00000539512 XYLBO75191 536 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 MAPTP10636 758 aaKnown RBP11.29□□□□□ -0.6
TRAV11-201ENST00000539512 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
TRAV11-201ENST00000539512 POTECB2RU33 542 aa11.28□□□□□ -0.6
TRAV11-201ENST00000539512 PLCB3Q01970 1234 aa11.28□□□□□ -0.6
TRAV11-201ENST00000539512 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
TRAV11-201ENST00000539512 C11orf16Q9NQ32 467 aa11.28□□□□□ -0.6
TRAV11-201ENST00000539512 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
TRAV11-201ENST00000539512 BNIP3LO60238 219 aa11.27□□□□□ -0.61
TRAV11-201ENST00000539512 TNP2Q05952 138 aa11.27□□□□□ -0.61
TRAV11-201ENST00000539512 FAM129BQ96TA1 746 aa11.27□□□□□ -0.61
TRAV11-201ENST00000539512 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
TRAV11-201ENST00000539512 THBS1P07996 1170 aa11.26□□□□□ -0.61
TRAV11-201ENST00000539512 KCNQ4P56696 695 aa11.26□□□□□ -0.61
TRAV11-201ENST00000539512 SFSWAPQ12872 951 aaKnown RBP11.26□□□□□ -0.61
TRAV11-201ENST00000539512 PDE12Q6L8Q7 609 aaKnown RBP11.26□□□□□ -0.61
TRAV11-201ENST00000539512 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
TRAV11-201ENST00000539512 CD33P20138 364 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 FGFR3P22607 806 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 MAPK8P45983 427 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 CCINQ13939 588 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 NIF3L1Q9GZT8 377 aa11.25□□□□□ -0.61
TRAV11-201ENST00000539512 GPR25O00155 361 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 EFSO43281 561 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 EAPPQ56P03 285 aaPredicted RBP11.24□□□□□ -0.61
TRAV11-201ENST00000539512 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
TRAV11-201ENST00000539512 NPAS3Q8IXF0 933 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 GGNBP2Q9H3C7 697 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 KCNMB2Q9Y691 235 aa11.24□□□□□ -0.61
TRAV11-201ENST00000539512 A6NHS1 94 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 TREHO43280 583 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 VEGFBP49765 207 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 FGD1P98174 961 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 SPEM2Q0P670 501 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
TRAV11-201ENST00000539512 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
TRAV11-201ENST00000539512 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
TRAV11-201ENST00000539512 KRT25Q7Z3Z0 450 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 SLC16A10Q8TF71 515 aa11.23□□□□□ -0.61
TRAV11-201ENST00000539512 NANOS1Q8WY41 292 aaKnown RBP11.23□□□□□ -0.61
TRAV11-201ENST00000539512 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
TRAV11-201ENST00000539512 GPR182O15218 404 aa11.22□□□□□ -0.61
TRAV11-201ENST00000539512 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
TRAV11-201ENST00000539512 ALKBH8Q96BT7 664 aaKnown RBP11.22□□□□□ -0.61
TRAV11-201ENST00000539512 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
TRAV11-201ENST00000539512 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
TRAV11-201ENST00000539512 NDFIP2Q9NV92 336 aa11.22□□□□□ -0.61
TRAV11-201ENST00000539512 PHACTR2O75167 634 aa11.21□□□□□ -0.61
TRAV11-201ENST00000539512 EGFRP00533 1210 aa11.21□□□□□ -0.61
TRAV11-201ENST00000539512 RARAP10276 462 aa11.21□□□□□ -0.61
TRAV11-201ENST00000539512 BMP4P12644 408 aa11.21□□□□□ -0.61
TRAV11-201ENST00000539512 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
TRAV11-201ENST00000539512 SASH3O75995 380 aa11.2□□□□□ -0.62
TRAV11-201ENST00000539512 GIPC2Q8TF65 315 aa11.2□□□□□ -0.62
TRAV11-201ENST00000539512 BHMTQ93088 406 aa11.2□□□□□ -0.62
TRAV11-201ENST00000539512 ABI2Q9NYB9 513 aaPredicted RBP11.2□□□□□ -0.62
TRAV11-201ENST00000539512 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
TRAV11-201ENST00000539512 H3BM21 787 aa11.19□□□□□ -0.62
TRAV11-201ENST00000539512 NFKB1P19838 968 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms