RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 ATP2B1P20020 1258 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 TRIM29Q14134 588 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 STAP2Q9UGK3 403 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 ADCK5Q3MIX3 580 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 CEP57L1Q8IYX8 460 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 GOLIM4O00461 696 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 CABP4P57796 275 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 PTPRMP28827 1452 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 PDIA4P13667 645 aaKnown RBP18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 XAGE3Q8WTP9 111 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 LINS1Q8NG48 757 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
ATP2A2-204ENST00000539276 ME3Q16798 604 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 AOX1Q06278 1338 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 RGS12O14924 1447 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
ATP2A2-204ENST00000539276 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 Q6ZUG5 572 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 KIDINS220Q9ULH0 1771 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 FSIP1Q8NA03 581 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 AK9Q5TCS8 1911 aa18.46■□□□□ 0.55
ATP2A2-204ENST00000539276 BIN1O00499 593 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 HAND2P61296 217 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 PDILTQ8N807 584 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 LSG1Q9H089 658 aaKnown RBP18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 MTMR6Q9Y217 621 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 SLC27A2O14975 620 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 LARGE1O95461 756 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 PTPN14Q15678 1187 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 CHST3Q7LGC8 479 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 ANKLE2Q86XL3 938 aa18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 CCAR1Q8IX12 1150 aaKnown RBP18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 FAM177A1Q8N128 213 aaPredicted RBP18.45■□□□□ 0.54
ATP2A2-204ENST00000539276 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 ARHGEF40Q8TER5 1519 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 MNS1Q8NEH6 495 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 TERF1P54274 439 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 ANKRD13DQ6ZTN6 518 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 POLR3DP05423 398 aaPredicted RBP18.44■□□□□ 0.54
ATP2A2-204ENST00000539276 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 BEND3Q5T5X7 828 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 LIG1P18858 919 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 ISM2Q6H9L7 571 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 SSH2Q76I76 1423 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 IGSF3O75054 1194 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 PDLIM2Q96JY6 352 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 TPCN1Q9ULQ1 816 aa18.43■□□□□ 0.54
ATP2A2-204ENST00000539276 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 ANO10Q9NW15 660 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 IGSF1Q8N6C5 1336 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 JAK2O60674 1132 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 SERPINC1P01008 464 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 MYRIPQ8NFW9 859 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 COL3A1P02461 1466 aaPredicted RBP18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 IP6K1Q92551 441 aa18.42■□□□□ 0.54
ATP2A2-204ENST00000539276 TTC6Q86TZ1 520 aa18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 ATF3P18847 181 aa18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 SIRT1Q96EB6 747 aa18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.41■□□□□ 0.541e-7■■■■□ 19.5
ATP2A2-204ENST00000539276 V9GYY5 206 aaPredicted RBP18.41■□□□□ 0.54
ATP2A2-204ENST00000539276 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 PI4K2BQ8TCG2 481 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms