RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 LINC00528Q8N1L1 170 aa6.17□□□□□ -1.42
SNHG1-208ENST00000538266 OGFOD1Q8N543 542 aa6.17□□□□□ -1.42
SNHG1-208ENST00000538266 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.17□□□□□ -1.426e-32■□□□□ 8.9
SNHG1-208ENST00000538266 ZFP42Q96MM3 310 aa6.17□□□□□ -1.42
SNHG1-208ENST00000538266 PURBQ96QR8 312 aaKnown RBP6.17□□□□□ -1.42
SNHG1-208ENST00000538266 DNAAF2Q9NVR5 837 aaKnown RBP6.17□□□□□ -1.42
SNHG1-208ENST00000538266 NEURL4Q96JN8 1562 aa6.17□□□□□ -1.42
SNHG1-208ENST00000538266 RIMS2Q9UQ26 1411 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 SCAF11Q99590 1463 aaKnown RBP6.16□□□□□ -1.42
SNHG1-208ENST00000538266 SLIT1O75093 1534 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 LCE2BO14633 110 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 CLDN10P78369 228 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 ESCO1Q5FWF5 840 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 RPGRIP1LQ68CZ1 1315 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 SPATA31E1Q6ZUB1 1445 aa6.16□□□□□ -1.42
SNHG1-208ENST00000538266 ARHGAP23Q9P227 1491 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-208ENST00000538266 MEN1O00255 615 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 SPINT1O43278 529 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 STAU1O95793 577 aaKnown RBP6.15□□□□□ -1.42
SNHG1-208ENST00000538266 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.42
SNHG1-208ENST00000538266 CCDC102BQ68D86 513 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 LARGE2Q8N3Y3 721 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 XAGE2Q96GT9 111 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 NLRP3Q96P20 1036 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 ARHGEF10LQ9HCE6 1279 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 RAB6BQ9NRW1 208 aa6.15□□□□□ -1.42
SNHG1-208ENST00000538266 RBM19Q9Y4C8 960 aaKnown RBP6.15□□□□□ -1.42
SNHG1-208ENST00000538266 TONSLQ96HA7 1378 aa6.15□□□□□ -1.43
SNHG1-208ENST00000538266 ZFYVE9O95405 1425 aa6.15□□□□□ -1.43
SNHG1-208ENST00000538266 NEXMIFQ5QGS0 1516 aa6.15□□□□□ -1.43
SNHG1-208ENST00000538266 IQGAP1P46940 1657 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 PPLO60437 1756 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 GDF10P55107 478 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 CNKSR1Q969H4 720 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 PBXIP1Q96AQ6 731 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 ZNF594Q96JF6 807 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-208ENST00000538266 SIN3AQ96ST3 1273 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 INSM2Q96T92 566 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-208ENST00000538266 ESYT1Q9BSJ8 1104 aa6.14□□□□□ -1.43
SNHG1-208ENST00000538266 POLMQ9NP87 494 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-208ENST00000538266 GMPR2Q9P2T1 348 aaKnown RBP6.14□□□□□ -1.43
SNHG1-208ENST00000538266 FIGNL2A6NMB9 653 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 INHAP05111 366 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 LTKP29376 864 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 CTSOP43234 321 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-208ENST00000538266 CLN3Q13286 438 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 PTK7Q13308 1070 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 CRTC2Q53ET0 693 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-208ENST00000538266 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.13□□□□□ -1.432e-85■□□□□ 9.7
SNHG1-208ENST00000538266 TPCN2Q8NHX9 752 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 DCAF11Q8TEB1 546 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 ETNK1Q9HBU6 452 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 SENP2Q9HC62 589 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 SERTAD1Q9UHV2 236 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 PLEKHG1Q9ULL1 1385 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 NPHP4O75161 1426 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-208ENST00000538266 MYOM2P54296 1465 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 IFT172Q9UG01 1749 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 STRCQ7RTU9 1775 aa6.13□□□□□ -1.43
SNHG1-208ENST00000538266 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 TTLL8A6PVC2 850 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 POTECB2RU33 542 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 TMEM229AB2RXF0 380 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 C11orf95C9JLR9 678 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-208ENST00000538266 MED14O60244 1454 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 IL2RAP01589 272 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 SCNN1DP51172 638 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 CENPCQ03188 943 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 DIP2AQ14689 1571 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 ANKMY2Q8IV38 441 aa6.12□□□□□ -1.43
SNHG1-208ENST00000538266 LAMC1P11047 1609 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 SETBP1Q9Y6X0 1596 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 SOS2Q07890 1332 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-208ENST00000538266 SFI1A8K8P3 1242 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 BACH1O14867 736 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 RNF144AP50876 292 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-208ENST00000538266 DPYDQ12882 1025 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 SLC27A3Q5K4L6 730 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 FAM200AQ8TCP9 573 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 L3MBTL2Q969R5 705 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 KIFC2Q96AC6 838 aa6.11□□□□□ -1.43
SNHG1-208ENST00000538266 PIK3C2GO75747 1445 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L15C9J2P7 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L10C9JJH3 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L13C9JLJ4 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L12C9JPN9 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L11C9JVI0 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L21D6R901 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L18D6R9N7 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L22D6RA61 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L17D6RBQ6 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L19D6RCP7 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 USP17L20D6RJB6 530 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 WASLO00401 505 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-208ENST00000538266 MAN1A2O60476 641 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 DKK1O94907 266 aa6.1□□□□□ -1.43
SNHG1-208ENST00000538266 ATG7O95352 703 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms