RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 SOGA3Q5TF21 947 aa19.43■□□□□ 0.7
UBC-204ENST00000536661 DDX60Q8IY21 1712 aaKnown RBP19.42■□□□□ 0.7
UBC-204ENST00000536661 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
UBC-204ENST00000536661 PPP1R42Q7Z4L9 355 aa19.42■□□□□ 0.7
UBC-204ENST00000536661 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
UBC-204ENST00000536661 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
UBC-204ENST00000536661 HSP90AB3PQ58FF7 597 aa19.41■□□□□ 0.7
UBC-204ENST00000536661 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
UBC-204ENST00000536661 WDR90Q96KV7 1748 aa19.41■□□□□ 0.7
UBC-204ENST00000536661 ALDH1B1P30837 517 aa19.4■□□□□ 0.7
UBC-204ENST00000536661 TCIRG1Q13488 830 aa19.4■□□□□ 0.7
UBC-204ENST00000536661 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
UBC-204ENST00000536661 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
UBC-204ENST00000536661 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
UBC-204ENST00000536661 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
UBC-204ENST00000536661 GLTPD2A6NH11 291 aa19.39■□□□□ 0.69
UBC-204ENST00000536661 ELL2O00472 640 aaPredicted RBP19.39■□□□□ 0.69
UBC-204ENST00000536661 NLRP10Q86W26 655 aa19.39■□□□□ 0.69
UBC-204ENST00000536661 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
UBC-204ENST00000536661 RBM46Q8TBY0 533 aaKnown RBP19.39■□□□□ 0.69
UBC-204ENST00000536661 TAF1P21675 1872 aa19.39■□□□□ 0.69
UBC-204ENST00000536661 HOXA10P31260 410 aaPredicted RBP19.38■□□□□ 0.69
UBC-204ENST00000536661 CCDC27Q2M243 656 aa19.38■□□□□ 0.69
UBC-204ENST00000536661 RNF123Q5XPI4 1314 aa19.38■□□□□ 0.69
UBC-204ENST00000536661 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
UBC-204ENST00000536661 HYPKQ9NX55 129 aa19.38■□□□□ 0.69
UBC-204ENST00000536661 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
UBC-204ENST00000536661 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
UBC-204ENST00000536661 WWC1Q8IX03 1113 aa19.37■□□□□ 0.69
UBC-204ENST00000536661 POTECB2RU33 542 aa19.36■□□□□ 0.69
UBC-204ENST00000536661 SLC10A5Q5PT55 438 aa19.36■□□□□ 0.69
UBC-204ENST00000536661 C16orf71Q8IYS4 520 aaPredicted RBP19.36■□□□□ 0.69
UBC-204ENST00000536661 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
UBC-204ENST00000536661 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
UBC-204ENST00000536661 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
UBC-204ENST00000536661 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
UBC-204ENST00000536661 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
UBC-204ENST00000536661 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
UBC-204ENST00000536661 RBM17Q96I25 401 aaKnown RBP19.35■□□□□ 0.69
UBC-204ENST00000536661 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
UBC-204ENST00000536661 CRAMP1Q96RY5 1269 aa19.35■□□□□ 0.69
UBC-204ENST00000536661 APLP1P51693 650 aa19.34■□□□□ 0.69
UBC-204ENST00000536661 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
UBC-204ENST00000536661 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
UBC-204ENST00000536661 ZNF277Q9NRM2 450 aaPredicted RBP19.34■□□□□ 0.69
UBC-204ENST00000536661 TRMT112Q9UI30 125 aaKnown RBP19.34■□□□□ 0.69
UBC-204ENST00000536661 SH3TC1Q8TE82 1336 aa19.33■□□□□ 0.69
UBC-204ENST00000536661 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.68
UBC-204ENST00000536661 PPEF1O14829 653 aaPredicted RBP19.33■□□□□ 0.68
UBC-204ENST00000536661 HCLS1P14317 486 aaPredicted RBP19.33■□□□□ 0.68
UBC-204ENST00000536661 FSTL1Q12841 308 aa19.33■□□□□ 0.68
UBC-204ENST00000536661 DNAJC5GQ8N7S2 189 aa19.33■□□□□ 0.68
UBC-204ENST00000536661 ABCC4O15439 1325 aa19.32■□□□□ 0.68
UBC-204ENST00000536661 VEGFAP15692 232 aaPredicted RBP19.32■□□□□ 0.68
UBC-204ENST00000536661 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
UBC-204ENST00000536661 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
UBC-204ENST00000536661 COL4A5P29400 1685 aa19.32■□□□□ 0.68
UBC-204ENST00000536661 SCN4AP35499 1836 aa19.32■□□□□ 0.68
UBC-204ENST00000536661 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
UBC-204ENST00000536661 IL16Q14005 1332 aa19.31■□□□□ 0.68
UBC-204ENST00000536661 HTRA3P83110 453 aa19.31■□□□□ 0.68
UBC-204ENST00000536661 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
UBC-204ENST00000536661 CC2D2BQ6DHV5 1058 aa19.31■□□□□ 0.68
UBC-204ENST00000536661 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
UBC-204ENST00000536661 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
UBC-204ENST00000536661 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
UBC-204ENST00000536661 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
UBC-204ENST00000536661 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
UBC-204ENST00000536661 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
UBC-204ENST00000536661 PSMD1Q99460 953 aa19.3■□□□□ 0.68
UBC-204ENST00000536661 SALL2Q9Y467 1007 aaPredicted RBP19.3■□□□□ 0.68
UBC-204ENST00000536661 COL4A1P02462 1669 aa19.29■□□□□ 0.68
UBC-204ENST00000536661 ZNF541Q9H0D2 1346 aa19.28■□□□□ 0.68
UBC-204ENST00000536661 FAM9BQ8IZU0 186 aa19.28■□□□□ 0.68
UBC-204ENST00000536661 SMC1BQ8NDV3 1235 aa19.28■□□□□ 0.68
UBC-204ENST00000536661 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
UBC-204ENST00000536661 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
UBC-204ENST00000536661 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
UBC-204ENST00000536661 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
UBC-204ENST00000536661 MYD88Q99836 296 aa19.27■□□□□ 0.68
UBC-204ENST00000536661 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
UBC-204ENST00000536661 ATP6V0A2Q9Y487 856 aa19.27■□□□□ 0.68
UBC-204ENST00000536661 MYH3P11055 1940 aa19.26■□□□□ 0.67
UBC-204ENST00000536661 GRIPAP1Q4V328 841 aa19.26■□□□□ 0.67
UBC-204ENST00000536661 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
UBC-204ENST00000536661 DUOX1Q9NRD9 1551 aa19.25■□□□□ 0.67
UBC-204ENST00000536661 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
UBC-204ENST00000536661 WDR63Q8IWG1 891 aa19.25■□□□□ 0.67
UBC-204ENST00000536661 FZD9O00144 591 aa19.24■□□□□ 0.67
UBC-204ENST00000536661 BBOX1O75936 387 aa19.24■□□□□ 0.67
UBC-204ENST00000536661 DDX58O95786 925 aaKnown RBP19.24■□□□□ 0.67
UBC-204ENST00000536661 GRAPQ13588 217 aa19.24■□□□□ 0.67
UBC-204ENST00000536661 GRAPLQ8TC17 118 aaPredicted RBP19.24■□□□□ 0.67
UBC-204ENST00000536661 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
UBC-204ENST00000536661 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
UBC-204ENST00000536661 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
UBC-204ENST00000536661 LTBP1Q14766 1721 aa19.23■□□□□ 0.67
UBC-204ENST00000536661 IRS4O14654 1257 aaPredicted RBP19.23■□□□□ 0.67
UBC-204ENST00000536661 SF3B3Q15393 1217 aaKnown RBP19.23■□□□□ 0.67
UBC-204ENST00000536661 ZBTB38Q8NAP3 1195 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms