RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 PSMD1Q99460 953 aa7.11□□□□□ -1.27
CHD4-205ENST00000536301 ZNF408Q9H9D4 720 aa7.11□□□□□ -1.27
CHD4-205ENST00000536301 NIP7Q9Y221 180 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD4-205ENST00000536301 COL3A1P02461 1466 aaPredicted RBP7.11□□□□□ -1.27
CHD4-205ENST00000536301 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
CHD4-205ENST00000536301 HSPA5P11021 654 aaKnown RBP7.1□□□□□ -1.27
CHD4-205ENST00000536301 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
CHD4-205ENST00000536301 BRPF1P55201 1214 aaPredicted RBP7.1□□□□□ -1.27
CHD4-205ENST00000536301 TEFQ10587 303 aa7.1□□□□□ -1.27
CHD4-205ENST00000536301 USP50Q70EL3 339 aaPredicted RBP7.1□□□□□ -1.27
CHD4-205ENST00000536301 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
CHD4-205ENST00000536301 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
CHD4-205ENST00000536301 TAF1P21675 1872 aa7.1□□□□□ -1.27
CHD4-205ENST00000536301 CEMIPQ8WUJ3 1361 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 AKAP11Q9UKA4 1901 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 GMPSP49915 693 aaPredicted RBP7.09□□□□□ -1.27
CHD4-205ENST00000536301 CXCL9Q07325 125 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 AOC3Q16853 763 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 CRY2Q49AN0 593 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 TPTE2Q6XPS3 522 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 TEX13AQ9BXU3 409 aaPredicted RBP7.09□□□□□ -1.27
CHD4-205ENST00000536301 GPRC5DQ9NZD1 345 aa7.09□□□□□ -1.27
CHD4-205ENST00000536301 NPC1L1Q9UHC9 1359 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 BTBD11A6QL63 1104 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 GNAT3A8MTJ3 354 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 FAM155AB1AL88 458 aaPredicted RBP7.08□□□□□ -1.28
CHD4-205ENST00000536301 PPIP5K2O43314 1243 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 CA12O43570 354 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
CHD4-205ENST00000536301 ALDH1B1P30837 517 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 PRPF38BQ5VTL8 546 aaKnown RBP7.08□□□□□ -1.28
CHD4-205ENST00000536301 NIM1KQ8IY84 436 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 PHACTR3Q96KR7 559 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
CHD4-205ENST00000536301 RIC1Q4ADV7 1423 aa7.08□□□□□ -1.28
CHD4-205ENST00000536301 UBN2Q6ZU65 1347 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 PPEF1O14829 653 aaPredicted RBP7.07□□□□□ -1.28
CHD4-205ENST00000536301 EGFRP00533 1210 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 GPTP24298 496 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 HUNKP57058 714 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 DCTN1Q14203 1278 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 TTLL7Q6ZT98 887 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 NPM2Q86SE8 214 aaKnown RBP7.07□□□□□ -1.28
CHD4-205ENST00000536301 USP48Q86UV5 1035 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 NGEFQ8N5V2 710 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 HHIPL1Q96JK4 782 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 PGAP2Q9UHJ9 254 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 ZNF652Q9Y2D9 606 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 LAMB2P55268 1798 aa7.07□□□□□ -1.28
CHD4-205ENST00000536301 KIAA0100Q14667 2235 aaKnown RBP7.07□□□□□ -1.28
CHD4-205ENST00000536301 LAMB4A4D0S4 1761 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 YDJCA8MPS7 323 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 TRPA1O75762 1119 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 RAD17O75943 681 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 GTF2E1P29083 439 aaPredicted RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 KIF23Q02241 960 aaPredicted RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 CNGB1Q14028 1251 aaPredicted RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 CC2D1BQ5T0F9 858 aaKnown RBP7.06□□□□□ -1.28
CHD4-205ENST00000536301 SUSD4Q5VX71 490 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 MCM10Q7L590 875 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 RNF186Q9NXI6 227 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 KNSTRNQ9Y448 316 aa7.06□□□□□ -1.28
CHD4-205ENST00000536301 DUOX1Q9NRD9 1551 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 ADM5C9JUS6 153 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 SNRPA1P09661 255 aaKnown RBP7.05□□□□□ -1.28
CHD4-205ENST00000536301 NOGQ13253 232 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 SAMD7Q7Z3H4 446 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 RPGRQ92834 1020 aaKnown RBP7.05□□□□□ -1.28
CHD4-205ENST00000536301 MIS18AQ9NYP9 233 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 ZBTB12Q9Y330 459 aaPredicted RBP7.05□□□□□ -1.28
CHD4-205ENST00000536301 COL4A1P02462 1669 aa7.05□□□□□ -1.28
CHD4-205ENST00000536301 ASTN2O75129 1339 aaPredicted RBP7.04□□□□□ -1.28
CHD4-205ENST00000536301 SCN9AQ15858 1988 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 HTTP42858 3142 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 NTSR2O95665 410 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 PRKAR2BP31323 418 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 TBC1D10BQ4KMP7 808 aaPredicted RBP7.04□□□□□ -1.28
CHD4-205ENST00000536301 RGMBQ6NW40 437 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 CDC37L1Q7L3B6 337 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 CRAMP1Q96RY5 1269 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 CSRNP1Q96S65 589 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 RSPH6AQ9H0K4 717 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 CNOT7Q9UIV1 285 aaKnown RBP7.04□□□□□ -1.28
CHD4-205ENST00000536301 ZNRF3Q9ULT6 936 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 HPS5Q9UPZ3 1129 aa7.04□□□□□ -1.28
CHD4-205ENST00000536301 ABCC4O15439 1325 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 KIF7Q2M1P5 1343 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 MAP3K15Q6ZN16 1313 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 PER1O15534 1290 aaPredicted RBP7.03□□□□□ -1.28
CHD4-205ENST00000536301 EIF4G2P78344 907 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD4-205ENST00000536301 CTU1Q7Z7A3 348 aaKnown RBP7.03□□□□□ -1.28
CHD4-205ENST00000536301 MICALL2Q8IY33 904 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 ZNF428Q96B54 188 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 RBM17Q96I25 401 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms