RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 POM121CA8CG34 1229 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 FLIIQ13045 1269 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 GAPVD1Q14C86 1478 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 USP17L3A6NCW0 530 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 USP17L4A6NCW7 530 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 SYT9Q86SS6 491 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ADAMTS19Q8TE59 1207 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
TNFRSF1A-206ENST00000535038 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 FURINP09958 794 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ALAS2P22557 587 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 CD163Q86VB7 1156 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
TNFRSF1A-206ENST00000535038 FMN1Q68DA7 1419 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SETD5Q9C0A6 1442 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 CHRNA4P43681 627 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 CLDN10P78369 228 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ATP9BO43861 1147 aa8.62□□□□□ -1.03
TNFRSF1A-206ENST00000535038 C7orf43Q8WVR3 580 aa8.62□□□□□ -1.03
TNFRSF1A-206ENST00000535038 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
TNFRSF1A-206ENST00000535038 TSPAN10Q9H1Z9 355 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SIN3BO75182 1162 aa8.61□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
TNFRSF1A-206ENST00000535038 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
TNFRSF1A-206ENST00000535038 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SPATA31C1P0DKV0 1188 aa8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 LARGE2Q8N3Y3 721 aa8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 MDFIQ99750 246 aa8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 M0R2N6 131 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 HCN4Q9Y3Q4 1203 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 EHBP1L1Q8N3D4 1523 aa8.59□□□□□ -1.03
TNFRSF1A-206ENST00000535038 MRC2Q9UBG0 1479 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SPDYE3A6NKU9 549 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 CENPBP07199 599 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SPEM2Q0P670 501 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 XP32Q5T750 250 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 POTEAQ6S8J7 498 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SIX5Q8N196 739 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 CEP63Q96MT8 703 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 UGGT2Q9NYU1 1516 aa8.58□□□□□ -1.04
TNFRSF1A-206ENST00000535038 TSEN2Q8NCE0 465 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-206ENST00000535038 WDR62O43379 1518 aa8.57□□□□□ -1.04
TNFRSF1A-206ENST00000535038 MAGI3Q5TCQ9 1506 aa8.57□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SUPT6HQ7KZ85 1726 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-206ENST00000535038 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 M0R082 166 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 PRRT3Q5FWE3 981 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 RAB44Q7Z6P3 723 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ZNF417Q8TAU3 575 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ZNF587Q96SQ5 575 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 IQGAP2Q13576 1575 aa8.56□□□□□ -1.04
TNFRSF1A-206ENST00000535038 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 PTPRKQ15262 1439 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 MYOM3Q5VTT5 1437 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 PTPN23Q9H3S7 1636 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ADH7P40394 386 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 GATA4P43694 442 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 TYRO3Q06418 890 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
TNFRSF1A-206ENST00000535038 CCDC18Q5T9S5 1454 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms