RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
SF3B2-216ENST00000534765 SALL3Q9BXA9 1300 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 SLIT2O94813 1529 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
SF3B2-216ENST00000534765 UNC5CLQ8IV45 518 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 DNAAF4Q8WXU2 420 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 ZSCAN20P17040 1043 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-216ENST00000534765 KCNQ4P56696 695 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 CABP4P57796 275 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 UTP14CQ5TAP6 766 aaKnown RBP10.93□□□□□ -0.66
SF3B2-216ENST00000534765 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-216ENST00000534765 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 ATP5J2-PTCD1G3V325 749 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 SUCLG2Q96I99 432 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 TMX1Q9H3N1 280 aa10.93□□□□□ -0.66
SF3B2-216ENST00000534765 CCT4P50991 539 aaKnown RBP10.92□□□□□ -0.66
SF3B2-216ENST00000534765 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
SF3B2-216ENST00000534765 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
SF3B2-216ENST00000534765 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
SF3B2-216ENST00000534765 SYNE4Q8N205 404 aa10.92□□□□□ -0.66
SF3B2-216ENST00000534765 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
SF3B2-216ENST00000534765 MYH14Q7Z406 1995 aaKnown RBP10.92□□□□□ -0.66
SF3B2-216ENST00000534765 COL4A1P02462 1669 aa10.92□□□□□ -0.66
SF3B2-216ENST00000534765 KCNQ2O43526 872 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 HOXB7P09629 217 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 FOXD4L6Q3SYB3 417 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 TAF3Q5VWG9 929 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 FOXD4L3Q6VB84 417 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 KIF2CQ99661 725 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 CD2BP2O95400 341 aaKnown RBP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 U2AF2P26368 475 aaKnown RBP eCLIP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 CCDC66A2RUB6 948 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 GNAI2P04899 355 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 ATP8B2P98198 1209 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-216ENST00000534765 ACSBG1Q96GR2 724 aa10.91□□□□□ -0.66
SF3B2-216ENST00000534765 TNNT1P13805 278 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
SF3B2-216ENST00000534765 SKOR2Q2VWA4 1001 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-216ENST00000534765 KSR2Q6VAB6 950 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 POLA2Q14181 598 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 C22orf23Q9BZE7 217 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 SRCIN1Q9C0H9 1055 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 TBC1D9Q6ZT07 1266 aa10.9□□□□□ -0.66
SF3B2-216ENST00000534765 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
SF3B2-216ENST00000534765 SPATA31A1Q5TZJ5 1347 aa10.9□□□□□ -0.67
SF3B2-216ENST00000534765 MYD88Q99836 296 aa10.9□□□□□ -0.67
SF3B2-216ENST00000534765 BICC1Q9H694 974 aaKnown RBP10.9□□□□□ -0.67
SF3B2-216ENST00000534765 KIF3AQ9Y496 699 aa10.9□□□□□ -0.67
SF3B2-216ENST00000534765 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.67
SF3B2-216ENST00000534765 MAP4K4O95819 1239 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-216ENST00000534765 CHGBP05060 677 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 DNAJC10Q8IXB1 793 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 RPAP2Q8IXW5 612 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-216ENST00000534765 TNPO1Q92973 898 aaKnown RBP10.89□□□□□ -0.67
SF3B2-216ENST00000534765 NEURL1BA8MQ27 555 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 SNRPA1P09661 255 aaKnown RBP10.89□□□□□ -0.67
SF3B2-216ENST00000534765 SSH3Q8TE77 659 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
SF3B2-216ENST00000534765 BCL9O00512 1426 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 SDSP20132 328 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 PRIM1P49642 420 aaKnown RBP10.88□□□□□ -0.67
SF3B2-216ENST00000534765 CASP7P55210 303 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 ATP2B3Q16720 1220 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 GPATCH11Q8N954 259 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 TLR7Q9NYK1 1049 aaKnown RBP10.88□□□□□ -0.67
SF3B2-216ENST00000534765 UBTFL1P0CB47 393 aaPredicted RBP10.88□□□□□ -0.67
SF3B2-216ENST00000534765 AMIGO3Q86WK7 504 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 FMNL2Q96PY5 1086 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
SF3B2-216ENST00000534765 SRGAP3O43295 1099 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 CNPY4Q8N129 248 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 ZBTB3Q9H5J0 574 aa10.88□□□□□ -0.67
SF3B2-216ENST00000534765 ISY1Q9ULR0 285 aaKnown RBP10.88□□□□□ -0.67
SF3B2-216ENST00000534765 C17orf53Q8N3J3 647 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-216ENST00000534765 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-216ENST00000534765 HLFQ16534 295 aa10.87□□□□□ -0.67
SF3B2-216ENST00000534765 TTC22Q5TAA0 569 aa10.87□□□□□ -0.67
SF3B2-216ENST00000534765 TOMM22Q9NS69 142 aa10.87□□□□□ -0.67
SF3B2-216ENST00000534765 CCDC39Q9UFE4 941 aa10.87□□□□□ -0.67
SF3B2-216ENST00000534765 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
SF3B2-216ENST00000534765 SYTL4Q96C24 671 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-216ENST00000534765 SASH1O94885 1247 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 BMP2KLQ5H9B9 411 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 TTC5Q8N0Z6 440 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 TIGD1Q96MW7 591 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 C8orf37Q96NL8 207 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 HDAC5Q9UQL6 1122 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 PDE1AP54750 535 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-216ENST00000534765 GCKRQ14397 625 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms