RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 GDF2Q9UK05 429 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 TNFRSF10BO14763 440 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 OIP5O43482 229 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 INPP5BP32019 993 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 MAP3K10Q02779 954 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 GGA1Q9UJY5 639 aa7.72□□□□□ -1.17
ATPAF1-211ENST00000534216 BRD2P25440 801 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 ADH6P28332 368 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 PCBP4P57723 403 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 SPEM2Q0P670 501 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 FAM26DQ5JW98 314 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 C1orf229Q6ZS94 237 aaPredicted RBP7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 TREML1Q86YW5 311 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
ATPAF1-211ENST00000534216 NEURL1BA8MQ27 555 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 OPLAHO14841 1288 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 EPB42P16452 691 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 ARSDP51689 593 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 ETFBKMTQ8IXQ9 262 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
ATPAF1-211ENST00000534216 SYT9Q86SS6 491 aa7.69□□□□□ -1.18
ATPAF1-211ENST00000534216 GALNT6Q8NCL4 622 aa7.69□□□□□ -1.18
ATPAF1-211ENST00000534216 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
ATPAF1-211ENST00000534216 STIM2Q9P246 746 aa7.69□□□□□ -1.18
ATPAF1-211ENST00000534216 SHISA8B8ZZ34 492 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 PDE4CQ08493 712 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 B4GALNT3Q6L9W6 998 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 FCHSD1Q86WN1 690 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 HELQQ8TDG4 1101 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
ATPAF1-211ENST00000534216 SIN3BO75182 1162 aa7.67□□□□□ -1.18
ATPAF1-211ENST00000534216 EPXP11678 715 aa7.67□□□□□ -1.18
ATPAF1-211ENST00000534216 NEUROD1Q13562 356 aa7.67□□□□□ -1.18
ATPAF1-211ENST00000534216 GTF3C2Q8WUA4 911 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-211ENST00000534216 RTCBQ9Y3I0 505 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-211ENST00000534216 ZBTB39O15060 712 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 CCINQ13939 588 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 RGL4Q8IZJ4 473 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 BHMTQ93088 406 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 C11orf16Q9NQ32 467 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 MTMR7Q9Y216 660 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 USP20Q9Y2K6 914 aa7.66□□□□□ -1.18
ATPAF1-211ENST00000534216 ABTB2Q8N961 1025 aa7.65□□□□□ -1.18
ATPAF1-211ENST00000534216 MDFIQ99750 246 aa7.65□□□□□ -1.18
ATPAF1-211ENST00000534216 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 ZAP70P43403 619 aa7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 CMTR1Q8N1G2 835 aaKnown RBP7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 TNFRSF25Q93038 417 aa7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 BTBD6Q96KE9 485 aa7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 KCNMB2Q9Y691 235 aa7.64□□□□□ -1.19
ATPAF1-211ENST00000534216 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 ELOA3DA6NLF2 546 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 EGFRP00533 1210 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 NFKB1P19838 968 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 MARSP56192 900 aaKnown RBP7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 MTMR3Q13615 1198 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 ELOA3BQ3SY89 546 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 ELOA3Q8NG57 546 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 FAM13BQ9NYF5 915 aa7.63□□□□□ -1.19
ATPAF1-211ENST00000534216 XYLBO75191 536 aa7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 AMPD1P23109 780 aa7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 TARSP26639 723 aaKnown RBP7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 CHSY3Q70JA7 882 aa7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 PIK3R5Q8WYR1 880 aa7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
ATPAF1-211ENST00000534216 SASH3O75995 380 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 MAP3K6O95382 1288 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 NPR3P17342 541 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 MPSTP25325 297 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 ADH7P40394 386 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 FKBP4Q02790 459 aaKnown RBP eCLIP7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 SF3B2Q13435 895 aaKnown RBP7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 TRIP4Q15650 581 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 ATCAYQ86WG3 371 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 GPR152Q8TDT2 470 aa7.61□□□□□ -1.19
ATPAF1-211ENST00000534216 ABL1P00519 1130 aa7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 ALAS2P22557 587 aa7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 EIF1AXP47813 144 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 SNRPNP63162 240 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 ZNF211Q13398 564 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 NOM1Q5C9Z4 860 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 TXNDC2Q86VQ3 553 aa7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
ATPAF1-211ENST00000534216 ANO2Q9NQ90 1003 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms