RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 LSG1Q9H089 658 aaKnown RBP19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 RAD50Q92878 1312 aa19.16■□□□□ 0.66
ATP2C1-224ENST00000533801 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 IL2RBP14784 551 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 COL9A3Q14050 684 aaPredicted RBP19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 NBPF14Q5TI25 921 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 SYCE3A1L190 88 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 EVI5LQ96CN4 794 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 LARGE1O95461 756 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 PLCB2Q00722 1185 aa19.15■□□□□ 0.66
ATP2C1-224ENST00000533801 HSP90B1P14625 803 aaKnown RBP19.14■□□□□ 0.65
ATP2C1-224ENST00000533801 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.65
ATP2C1-224ENST00000533801 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
ATP2C1-224ENST00000533801 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 GOLIM4O00461 696 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 FAM89AQ96GI7 184 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 CYP46A1Q9Y6A2 500 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 TAF6LQ9Y6J9 622 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 TTC41PQ6P2S7 1318 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 DBNLQ9UJU6 430 aaKnown RBP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 ZNF589Q86UQ0 364 aaPredicted RBP19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 LMBRD1Q9NUN5 540 aa19.13■□□□□ 0.65
ATP2C1-224ENST00000533801 SYNE4Q8N205 404 aa19.12■□□□□ 0.65
ATP2C1-224ENST00000533801 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
ATP2C1-224ENST00000533801 MCM2P49736 904 aa19.12■□□□□ 0.65
ATP2C1-224ENST00000533801 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
ATP2C1-224ENST00000533801 RUFY3Q7L099 469 aa19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 LRRC24Q50LG9 513 aa19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 CWC25Q9NXE8 425 aaPredicted RBP19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 PTPN12Q05209 780 aaKnown RBP19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 PUS3Q9BZE2 481 aaKnown RBP19.11■□□□□ 0.65
ATP2C1-224ENST00000533801 ADAMTSL3P82987 1691 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 NCAPD2Q15021 1401 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 ANAPC15P60006 121 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 KLHL40Q2TBA0 621 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 ZSCAN23Q3MJ62 389 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 TNNI3KQ59H18 835 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 GPT2Q8TD30 523 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 FPGT-TNNI3KV9GXZ4 949 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 LIMCH1Q9UPQ0 1083 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 AOX1Q06278 1338 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 CCDC171Q6TFL3 1326 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 GADD45BO75293 160 aaPredicted RBP19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 MTX1Q13505 466 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 CREB3L3Q68CJ9 461 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 FAM173BQ6P4H8 233 aa19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 RRAGDQ9NQL2 400 aaPredicted RBP19.1■□□□□ 0.65
ATP2C1-224ENST00000533801 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
ATP2C1-224ENST00000533801 PLBD2Q8NHP8 589 aa19.09■□□□□ 0.65
ATP2C1-224ENST00000533801 CNPY2Q9Y2B0 182 aa19.09■□□□□ 0.65
ATP2C1-224ENST00000533801 ACSBG1Q96GR2 724 aa19.09■□□□□ 0.65
ATP2C1-224ENST00000533801 FSD2A1L4K1 749 aa19.09■□□□□ 0.65
ATP2C1-224ENST00000533801 GJB2P29033 226 aa19.08■□□□□ 0.65
ATP2C1-224ENST00000533801 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.65
ATP2C1-224ENST00000533801 KDM4AO75164 1064 aa19.08■□□□□ 0.64
ATP2C1-224ENST00000533801 DDX11Q96FC9 970 aa19.08■□□□□ 0.64
ATP2C1-224ENST00000533801 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
ATP2C1-224ENST00000533801 TBC1D2BQ9UPU7 963 aa19.08■□□□□ 0.64
ATP2C1-224ENST00000533801 CHST3Q7LGC8 479 aa19.07■□□□□ 0.64
ATP2C1-224ENST00000533801 BLOC1S2Q6QNY1 142 aa19.07■□□□□ 0.64
ATP2C1-224ENST00000533801 WASHC4Q2M389 1173 aa19.07■□□□□ 0.64
ATP2C1-224ENST00000533801 PTMSP20962 102 aa19.06■□□□□ 0.64
ATP2C1-224ENST00000533801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■■□□ 15.2
ATP2C1-224ENST00000533801 TMEM63CQ9P1W3 806 aa19.06■□□□□ 0.64
ATP2C1-224ENST00000533801 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
ATP2C1-224ENST00000533801 PIP4K2BP78356 416 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 SLIT3O75094 1523 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 SLC27A2O14975 620 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 SYT1P21579 422 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 RAB11FIP4Q86YS3 637 aa19.05■□□□□ 0.64
ATP2C1-224ENST00000533801 CEBPZQ03701 1054 aaKnown RBP19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 CYP2E1P05181 493 aaPredicted RBP19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 HAND2P61296 217 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 WDR33Q9C0J8 1336 aaKnown RBP19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 STX6O43752 255 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 BRD1O95696 1058 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 ME3Q16798 604 aa19.04■□□□□ 0.64
ATP2C1-224ENST00000533801 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms