RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 NYXQ9GZU5 481 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 RIMS2Q9UQ26 1411 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 MCM4P33991 863 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 C20orf194Q5TEA3 1177 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 CALML4Q96GE6 196 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 ANO10Q9NW15 660 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 SPA17Q15506 151 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 PLCH2O75038 1416 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 TSPY3P0CV98 308 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 TSPY8P0CW00 308 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 IDEP14735 1019 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 RAB11FIP4Q86YS3 637 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 BTG4Q9NY30 223 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 PPIP5K1Q6PFW1 1433 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 A2MP01023 1474 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 RIMBP2O15034 1052 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 CKAP2LQ8IYA6 745 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 NFATC2IPQ8NCF5 419 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 CENPHQ9H3R5 247 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 CETN1Q12798 172 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 TRAF1Q13077 416 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 TAX1BP1Q86VP1 789 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 CNNM3Q8NE01 707 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 TSPYL1Q9H0U9 437 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 PLEKHH1Q9ULM0 1364 aa7.39□□□□□ -1.23
UBQLN1-206ENST00000533705 DISP3Q9P2K9 1392 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 ZFYP08048 801 aaPredicted RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 METAP2P50579 478 aaKnown RBP eCLIP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 AMPD3Q01432 767 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 PPP4R3BQ5MIZ7 849 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 MTERF4Q7Z6M4 381 aaKnown RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 MAP7D2Q96T17 732 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 STK32BQ9NY57 414 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 RHPN1Q8TCX5 695 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 NEK1Q96PY6 1258 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 HMG20BQ9P0W2 317 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 ORC3Q9UBD5 711 aaPredicted RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 ALDH1L1O75891 902 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 LMOD1P29536 600 aaPredicted RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 PLS1Q14651 629 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 STXBP4Q6ZWJ1 553 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 CWC15Q9P013 229 aaKnown RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 GNPATO15228 680 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 EZRP15311 586 aaKnown RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 UBA7P41226 1012 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 ANAPC15P60006 121 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 CCDC178Q5BJE1 867 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 PPFIA3O75145 1194 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 SLC4A4Q9Y6R1 1079 aa7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 GPATCH8Q9UKJ3 1502 aaKnown RBP7.38□□□□□ -1.23
UBQLN1-206ENST00000533705 RPRD2Q5VT52 1461 aaKnown RBP7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 WDR7Q9Y4E6 1490 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 SYCE3A1L190 88 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 GRM8O00222 908 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 GCP02774 474 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 SFPQP23246 707 aaKnown RBP eCLIP7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 IL15P40933 162 aaPredicted RBP7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 TRAPPC3LQ5T215 181 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 TCERG1LQ5VWI1 586 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 TSHZ3Q63HK5 1081 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 SYCP3Q8IZU3 236 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 MCM5P33992 734 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 SLC26A6Q9BXS9 759 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 ZRANB1Q9UGI0 708 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 KCNA6P17658 529 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 USP8P40818 1118 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 WTAPQ15007 396 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 ESR2Q92731 530 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 KRT23Q9C075 422 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 ZNF518AQ6AHZ1 1483 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 CTAGE5O15320 804 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 CCDC148Q8NFR7 591 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 PANK2Q9BZ23 570 aa7.37□□□□□ -1.23
UBQLN1-206ENST00000533705 EIF3JO75822 258 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 EIF4A2Q14240 407 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 FSIP1Q8NA03 581 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 ARHGAP45Q92619 1136 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 BICD1Q96G01 975 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 EYA3Q99504 573 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 PYM1Q9BRP8 204 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 LEKR1Q6ZMV7 388 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 HELBQ8NG08 1087 aaPredicted RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 MACROD2A1Z1Q3 448 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 CCDC40Q4G0X9 1142 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 TDRD12Q587J7 1177 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 CCDC183Q5T5S1 534 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 FERMT2Q96AC1 680 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms