RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CWC27Q6UX04 472 aaKnown RBP34.57■■■■□ 3.12
SAMD1-202ENST00000533683 EVI5LQ96CN4 794 aa34.56■■■■□ 3.12
SAMD1-202ENST00000533683 KAT6BQ8WYB5 2073 aa34.56■■■■□ 3.12
SAMD1-202ENST00000533683 NEK4P51957 841 aa34.56■■■■□ 3.12
SAMD1-202ENST00000533683 STARD3NLO95772 234 aa34.55■■■■□ 3.12
SAMD1-202ENST00000533683 ZNF330Q9Y3S2 320 aaPredicted RBP34.55■■■■□ 3.12
SAMD1-202ENST00000533683 RAB3GAP1Q15042 981 aa34.55■■■■□ 3.12
SAMD1-202ENST00000533683 DIAPH3Q9NSV4 1193 aa34.55■■■■□ 3.12
SAMD1-202ENST00000533683 HSPA4P34932 840 aa34.54■■■■□ 3.12
SAMD1-202ENST00000533683 RAD50Q92878 1312 aa34.54■■■■□ 3.12
SAMD1-202ENST00000533683 TFCP2Q12800 502 aa34.53■■■■□ 3.12
SAMD1-202ENST00000533683 ISCA1Q9BUE6 129 aa34.53■■■■□ 3.12
SAMD1-202ENST00000533683 LSG1Q9H089 658 aaKnown RBP34.53■■■■□ 3.12
SAMD1-202ENST00000533683 TNPO1Q92973 898 aaKnown RBP34.52■■■■□ 3.12
SAMD1-202ENST00000533683 TCIRG1Q13488 830 aa34.52■■■■□ 3.12
SAMD1-202ENST00000533683 SLC4A9Q96Q91 983 aa34.52■■■■□ 3.12
SAMD1-202ENST00000533683 TNNI3KQ59H18 835 aa34.51■■■■□ 3.12
SAMD1-202ENST00000533683 CHMP3Q9Y3E7 222 aa34.51■■■■□ 3.12
SAMD1-202ENST00000533683 FPGT-TNNI3KV9GXZ4 949 aa34.51■■■■□ 3.12
SAMD1-202ENST00000533683 RUFY2Q8WXA3 655 aa34.5■■■■□ 3.11
SAMD1-202ENST00000533683 SYTL4Q96C24 671 aaPredicted RBP34.5■■■■□ 3.11
SAMD1-202ENST00000533683 SPATA31A1Q5TZJ5 1347 aa34.5■■■■□ 3.11
SAMD1-202ENST00000533683 BOLA2Q9H3K6 86 aa34.5■■■■□ 3.11
SAMD1-202ENST00000533683 NRAPQ86VF7 1730 aa34.49■■■■□ 3.11
SAMD1-202ENST00000533683 KIAA1211Q6ZU35 1233 aa34.49■■■■□ 3.11
SAMD1-202ENST00000533683 CDCA7Q9BWT1 371 aaPredicted RBP34.49■■■■□ 3.11
SAMD1-202ENST00000533683 DBNLQ9UJU6 430 aaKnown RBP34.49■■■■□ 3.11
SAMD1-202ENST00000533683 KIF6Q6ZMV9 814 aa34.48■■■■□ 3.11
SAMD1-202ENST00000533683 PRIM1P49642 420 aaKnown RBP34.47■■■■□ 3.11
SAMD1-202ENST00000533683 TRIM28Q13263 835 aaKnown RBP34.47■■■■□ 3.11
SAMD1-202ENST00000533683 CYP19A1P11511 503 aaPredicted RBP34.46■■■■□ 3.11
SAMD1-202ENST00000533683 THRAP3Q9Y2W1 955 aaKnown RBP34.46■■■■□ 3.11
SAMD1-202ENST00000533683 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.45■■■■□ 3.11
SAMD1-202ENST00000533683 MCM2P49736 904 aa34.45■■■■□ 3.11
SAMD1-202ENST00000533683 NUTM2BA6NNL0 878 aaPredicted RBP34.44■■■■□ 3.1
SAMD1-202ENST00000533683 NUTM2EB1AL46 878 aaPredicted RBP34.44■■■■□ 3.1
SAMD1-202ENST00000533683 ATG9AQ7Z3C6 839 aa34.44■■■■□ 3.1
SAMD1-202ENST00000533683 NUTM2AQ8IVF1 878 aaPredicted RBP34.44■■■■□ 3.1
SAMD1-202ENST00000533683 UPF3BQ9BZI7 483 aaKnown RBP34.43■■■■□ 3.1
SAMD1-202ENST00000533683 DOT1LQ8TEK3 1739 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 MAP3K15Q6ZN16 1313 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 HIP1O00291 1037 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 ATP5JP18859 108 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 PIP4K2BP78356 416 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 DDB1Q16531 1140 aa34.43■■■■□ 3.1
SAMD1-202ENST00000533683 TMX3Q96JJ7 454 aa34.42■■■■□ 3.1
SAMD1-202ENST00000533683 ARXQ96QS3 562 aa34.42■■■■□ 3.1
SAMD1-202ENST00000533683 SNX14Q9Y5W7 946 aa34.42■■■■□ 3.1
SAMD1-202ENST00000533683 CWC22Q9HCG8 908 aaKnown RBP34.42■■■■□ 3.1
SAMD1-202ENST00000533683 ZGPATQ8N5A5 531 aaKnown RBP34.41■■■■□ 3.1
SAMD1-202ENST00000533683 SSFA2P28290 1259 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 PTH1RQ03431 593 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 GIGYF2Q6Y7W6 1299 aaKnown RBP34.4■■■■□ 3.1
SAMD1-202ENST00000533683 FAM227BQ96M60 508 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 DBNDD2Q9BQY9 259 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 RASEFQ8IZ41 740 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 FSD1Q9BTV5 496 aa34.4■■■■□ 3.1
SAMD1-202ENST00000533683 DDX11L8A8MPP1 907 aa34.39■■■■□ 3.1
SAMD1-202ENST00000533683 NMIQ13287 307 aaPredicted RBP34.39■■■■□ 3.1
SAMD1-202ENST00000533683 GBP4Q96PP9 640 aa34.39■■■■□ 3.1
SAMD1-202ENST00000533683 ZBTB1Q9Y2K1 713 aa34.39■■■■□ 3.1
SAMD1-202ENST00000533683 TOM1O60784 492 aa34.39■■■■□ 3.1
SAMD1-202ENST00000533683 HLFQ16534 295 aa34.39■■■■□ 3.1
SAMD1-202ENST00000533683 PCCAP05165 728 aaPredicted RBP34.38■■■■□ 3.09
SAMD1-202ENST00000533683 SPATA31A5Q5VU36 1347 aa34.38■■■■□ 3.09
SAMD1-202ENST00000533683 SPATA31A7Q8IWB4 1347 aa34.38■■■■□ 3.09
SAMD1-202ENST00000533683 ZNF594Q96JF6 807 aaPredicted RBP34.38■■■■□ 3.09
SAMD1-202ENST00000533683 IL15P40933 162 aaPredicted RBP34.38■■■■□ 3.09
SAMD1-202ENST00000533683 EDC3Q96F86 508 aaKnown RBP34.37■■■■□ 3.09
SAMD1-202ENST00000533683 FAM89AQ96GI7 184 aa34.37■■■■□ 3.09
SAMD1-202ENST00000533683 EYA2O00167 538 aa34.36■■■■□ 3.09
SAMD1-202ENST00000533683 IL27Q8NEV9 243 aa34.36■■■■□ 3.09
SAMD1-202ENST00000533683 LRRC24Q50LG9 513 aa34.36■■■■□ 3.09
SAMD1-202ENST00000533683 ZBTB38Q8NAP3 1195 aaPredicted RBP34.36■■■■□ 3.09
SAMD1-202ENST00000533683 SNRKQ9NRH2 765 aa34.36■■■■□ 3.09
SAMD1-202ENST00000533683 NUCB2P80303 420 aa34.35■■■■□ 3.09
SAMD1-202ENST00000533683 MARCH10Q8NA82 808 aaPredicted RBP34.35■■■■□ 3.09
SAMD1-202ENST00000533683 GPR108Q9NPR9 543 aa34.35■■■■□ 3.09
SAMD1-202ENST00000533683 CCDC171Q6TFL3 1326 aa34.35■■■■□ 3.09
SAMD1-202ENST00000533683 A0A0D9SFI3 127 aa34.34■■■■□ 3.09
SAMD1-202ENST00000533683 CUL4AQ13619 759 aa34.34■■■■□ 3.09
SAMD1-202ENST00000533683 SLIT2O94813 1529 aa34.34■■■■□ 3.09
SAMD1-202ENST00000533683 CIAO1O76071 339 aa34.33■■■■□ 3.09
SAMD1-202ENST00000533683 CYP2E1P05181 493 aaPredicted RBP34.33■■■■□ 3.09
SAMD1-202ENST00000533683 NOL8Q76FK4 1167 aaKnown RBP34.33■■■■□ 3.09
SAMD1-202ENST00000533683 PLA2G12BQ9BX93 195 aa34.33■■■■□ 3.09
SAMD1-202ENST00000533683 NWD2Q9ULI1 1742 aa34.33■■■■□ 3.09
SAMD1-202ENST00000533683 TRAK2O60296 914 aa34.33■■■■□ 3.09
SAMD1-202ENST00000533683 CLEC17AQ6ZS10 378 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 GPTP24298 496 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 PKP1Q13835 747 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 CCDC57Q2TAC2 916 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 HSP90AB3PQ58FF7 597 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 NLRP10Q86W26 655 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 HAUS7Q99871 368 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 PUS3Q9BZE2 481 aaKnown RBP34.32■■■■□ 3.08
SAMD1-202ENST00000533683 CCDC9Q9Y3X0 531 aaKnown RBP34.32■■■■□ 3.08
SAMD1-202ENST00000533683 NDUFB9Q9Y6M9 179 aa34.32■■■■□ 3.08
SAMD1-202ENST00000533683 KCNB2Q92953 911 aa34.31■■■■□ 3.08
SAMD1-202ENST00000533683 ACSBG1Q96GR2 724 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms