RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GNPATO15228 680 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 NEK4P51957 841 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 KRBA2Q6ZNG9 492 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 CCNL1Q9UK58 526 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 SLIT1O75093 1534 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 IVLP07476 585 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 CEP135Q66GS9 1140 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 DEFB132Q7Z7B7 95 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 FIBPO43427 364 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 MVPQ14764 893 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 TERF2Q15554 542 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 COPS6Q7L5N1 327 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 DCAF5Q96JK2 942 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 MYD88Q99836 296 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 CARD10Q9BWT7 1032 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 TRIM35Q9UPQ4 493 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 WDR33Q9C0J8 1336 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 PI4KAP2A4QPH2 592 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 PHKG2P15735 406 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 ZNF772Q68DY9 489 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 KIF6Q6ZMV9 814 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 PI4KAP1Q8N8J0 262 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 ANKRD20A12PQ8NF67 263 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 DIP2AQ14689 1571 aa7.98□□□□□ -1.13
TGFBR3-209ENST00000532540 EIF3JO75822 258 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 DDX58O95786 925 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 SKIDA1Q1XH10 827 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 TTLL5Q6EMB2 1281 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 FAM107BQ9H098 131 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 V9GYY5 206 aaPredicted RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 NKTRP30414 1462 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 ZPR1O75312 459 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 TPM1P09493 284 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 PCDH11XQ9BZA7 1347 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 PCDH11YQ9BZA8 1340 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 UBR1Q8IWV7 1749 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 PSDA5PKW4 1024 aaPredicted RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 ZNF790Q6PG37 636 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 G2E3Q7L622 706 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 GTF3C6Q969F1 213 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 USP19O94966 1318 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 INSRP06213 1382 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 CASQ1P31415 396 aa7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 RBM28Q9NW13 759 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-209ENST00000532540 POLR3AO14802 1390 aaPredicted RBP7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 G3V3G9 751 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 RFC4P35249 363 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 ICE2Q659A1 982 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 CHD1LQ86WJ1 897 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 BRMS1Q9HCU9 246 aa7.96□□□□□ -1.13
TGFBR3-209ENST00000532540 GOLIM4O00461 696 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 SLU7O95391 586 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 WDR63Q8IWG1 891 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 PDLIM2Q96JY6 352 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 SMC3Q9UQE7 1217 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 ANKARQ7Z5J8 1434 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 IQGAP1P46940 1657 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 LOC102724159A0A0B4J2E5 919 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 CCP110O43303 1012 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 SNRPA1P09661 255 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 PWP2Q15269 919 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 BICD2Q8TD16 824 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 PIGBQ92521 554 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
TGFBR3-209ENST00000532540 CWF19L2Q2TBE0 894 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 ERCC4Q92889 916 aaPredicted RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 NRXN1Q9ULB1 1477 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 MAP3K5Q99683 1374 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 VPS37CA5D8V6 355 aaPredicted RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 LMBRD1Q9NUN5 540 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 CPSF1Q10570 1443 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 CCDC171Q6TFL3 1326 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 MAP2K2P36507 400 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 HNRNPH2P55795 449 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 RBM6P78332 1123 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 CCDC186Q7Z3E2 898 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 TMEM57Q8N5G2 664 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 MARCH10Q8NA82 808 aaPredicted RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 NOC3LQ8WTT2 800 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 GCC1Q96CN9 775 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 NEUROD6Q96NK8 337 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 MAP3K2Q9Y2U5 619 aa7.95□□□□□ -1.14
TGFBR3-209ENST00000532540 NEMFO60524 1076 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 KIAA0754O94854 1291 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 UBTFL1P0CB47 393 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 SARNPP82979 210 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 FLIIQ13045 1269 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 ZSCAN26Q16670 478 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 440.8 ms