RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
VPS26B-207ENST00000532160 RGL2O15211 777 aa12.26□□□□□ -0.45
VPS26B-207ENST00000532160 HSPA1AP0DMV8 641 aaKnown RBP12.26□□□□□ -0.45
VPS26B-207ENST00000532160 HSPA1BP0DMV9 641 aaKnown RBP12.26□□□□□ -0.45
VPS26B-207ENST00000532160 RIPK4P57078 832 aa12.26□□□□□ -0.45
VPS26B-207ENST00000532160 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS26B-207ENST00000532160 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
VPS26B-207ENST00000532160 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
VPS26B-207ENST00000532160 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
VPS26B-207ENST00000532160 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
VPS26B-207ENST00000532160 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
VPS26B-207ENST00000532160 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
VPS26B-207ENST00000532160 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
VPS26B-207ENST00000532160 GTF2E1P29083 439 aaPredicted RBP12.24□□□□□ -0.45
VPS26B-207ENST00000532160 MAP3K15Q6ZN16 1313 aa12.24□□□□□ -0.45
VPS26B-207ENST00000532160 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
VPS26B-207ENST00000532160 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
VPS26B-207ENST00000532160 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
VPS26B-207ENST00000532160 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
VPS26B-207ENST00000532160 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 COL4A5P29400 1685 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 ERVV-1B6SEH8 477 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 MYL6BP14649 208 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 GPTP24298 496 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 CRY2Q49AN0 593 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 TNS4Q8IZW8 715 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
VPS26B-207ENST00000532160 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 FZD9O00144 591 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 CAPN15O75808 1086 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 ALDH1B1P30837 517 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
VPS26B-207ENST00000532160 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
VPS26B-207ENST00000532160 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
VPS26B-207ENST00000532160 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.45
VPS26B-207ENST00000532160 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 CNTNAP1P78357 1384 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 IBTKQ9P2D0 1353 aaPredicted RBP12.2□□□□□ -0.46
VPS26B-207ENST00000532160 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
VPS26B-207ENST00000532160 EPHX2P34913 555 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 PSMD1Q99460 953 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
VPS26B-207ENST00000532160 NTSR2O95665 410 aa12.19□□□□□ -0.46
VPS26B-207ENST00000532160 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
VPS26B-207ENST00000532160 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPS26B-207ENST00000532160 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
VPS26B-207ENST00000532160 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
VPS26B-207ENST00000532160 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
VPS26B-207ENST00000532160 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
VPS26B-207ENST00000532160 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
VPS26B-207ENST00000532160 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
VPS26B-207ENST00000532160 ANXA1P04083 346 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 PDIA6Q15084 440 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 MAP1SQ66K74 1059 aaPredicted RBP12.18□□□□□ -0.46
VPS26B-207ENST00000532160 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
VPS26B-207ENST00000532160 GPC2Q8N158 579 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
VPS26B-207ENST00000532160 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
VPS26B-207ENST00000532160 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 TMEM88BA6NKF7 163 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
VPS26B-207ENST00000532160 FOXN1O15353 648 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
VPS26B-207ENST00000532160 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 LAMB2P55268 1798 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
VPS26B-207ENST00000532160 VEGFBP49765 207 aa12.16□□□□□ -0.46
VPS26B-207ENST00000532160 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
VPS26B-207ENST00000532160 RBM17Q96I25 401 aaKnown RBP12.16□□□□□ -0.46
VPS26B-207ENST00000532160 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
VPS26B-207ENST00000532160 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
VPS26B-207ENST00000532160 SCNN1DP51172 638 aa12.15□□□□□ -0.46
VPS26B-207ENST00000532160 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
VPS26B-207ENST00000532160 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
VPS26B-207ENST00000532160 PPP1R42Q7Z4L9 355 aa12.15□□□□□ -0.46
VPS26B-207ENST00000532160 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
VPS26B-207ENST00000532160 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
VPS26B-207ENST00000532160 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
VPS26B-207ENST00000532160 TAF1P21675 1872 aa12.14□□□□□ -0.47
VPS26B-207ENST00000532160 ABCC4O15439 1325 aa12.14□□□□□ -0.47
VPS26B-207ENST00000532160 EPS15P42566 896 aa12.14□□□□□ -0.47
VPS26B-207ENST00000532160 PARP10Q53GL7 1025 aa12.14□□□□□ -0.47
VPS26B-207ENST00000532160 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
VPS26B-207ENST00000532160 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
VPS26B-207ENST00000532160 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS26B-207ENST00000532160 AOC3Q16853 763 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms