RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
AMBRA1-210ENST00000531542 RPGRQ92834 1020 aaKnown RBP17.44■□□□□ 0.38
AMBRA1-210ENST00000531542 NUP98P52948 1817 aa17.44■□□□□ 0.38
AMBRA1-210ENST00000531542 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 CHADLQ6NUI6 762 aa17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
AMBRA1-210ENST00000531542 HTRA3P83110 453 aa17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 PROSER3Q2NL68 480 aa17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 UTP14AQ9BVJ6 771 aaKnown RBP17.42■□□□□ 0.38
AMBRA1-210ENST00000531542 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
AMBRA1-210ENST00000531542 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
AMBRA1-210ENST00000531542 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
AMBRA1-210ENST00000531542 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
AMBRA1-210ENST00000531542 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
AMBRA1-210ENST00000531542 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
AMBRA1-210ENST00000531542 GPC2Q8N158 579 aa17.4■□□□□ 0.38
AMBRA1-210ENST00000531542 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
AMBRA1-210ENST00000531542 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
AMBRA1-210ENST00000531542 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
AMBRA1-210ENST00000531542 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
AMBRA1-210ENST00000531542 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 ANXA1P04083 346 aa17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
AMBRA1-210ENST00000531542 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 BBOX1O75936 387 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 SCN4AP35499 1836 aa17.37■□□□□ 0.37
AMBRA1-210ENST00000531542 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 PLBD2Q8NHP8 589 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 TMX4Q9H1E5 349 aaPredicted RBP17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 PASKQ96RG2 1323 aa17.36■□□□□ 0.37
AMBRA1-210ENST00000531542 EPHX2P34913 555 aa17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 RTFDC1Q9BY42 306 aaPredicted RBP17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
AMBRA1-210ENST00000531542 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 LAS1LQ9Y4W2 734 aaKnown RBP17.34■□□□□ 0.37
AMBRA1-210ENST00000531542 ABCC4O15439 1325 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
AMBRA1-210ENST00000531542 GNAI1P63096 354 aa17.32■□□□□ 0.36
AMBRA1-210ENST00000531542 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
AMBRA1-210ENST00000531542 APAF1O14727 1248 aa17.31■□□□□ 0.36
AMBRA1-210ENST00000531542 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
AMBRA1-210ENST00000531542 DDX46Q7L014 1031 aaKnown RBP17.31■□□□□ 0.36
AMBRA1-210ENST00000531542 COL4A5P29400 1685 aa17.31■□□□□ 0.36
AMBRA1-210ENST00000531542 PCNTO95613 3336 aa17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 GRAPQ13588 217 aa17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 EAPPQ56P03 285 aaPredicted RBP17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
AMBRA1-210ENST00000531542 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
AMBRA1-210ENST00000531542 SCNN1DP51172 638 aa17.29■□□□□ 0.36
AMBRA1-210ENST00000531542 ZNRF3Q9ULT6 936 aa17.29■□□□□ 0.36
AMBRA1-210ENST00000531542 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 USP50Q70EL3 339 aaPredicted RBP17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 MPNDQ8N594 471 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
AMBRA1-210ENST00000531542 AOC3Q16853 763 aa17.27■□□□□ 0.36
AMBRA1-210ENST00000531542 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms