RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 GRM8O00222 908 aa23.95■■□□□ 1.42
SMPD1-205ENST00000531303 NBPF7P0C2Y1 421 aaPredicted RBP23.95■■□□□ 1.42
SMPD1-205ENST00000531303 GYS1P13807 737 aa23.95■■□□□ 1.42
SMPD1-205ENST00000531303 UBN2Q6ZU65 1347 aa23.95■■□□□ 1.42
SMPD1-205ENST00000531303 GNAI3P08754 354 aa23.94■■□□□ 1.42
SMPD1-205ENST00000531303 UBTFL1P0CB47 393 aaPredicted RBP23.94■■□□□ 1.42
SMPD1-205ENST00000531303 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
SMPD1-205ENST00000531303 UBE3BQ7Z3V4 1068 aa23.94■■□□□ 1.42
SMPD1-205ENST00000531303 SUSD4Q5VX71 490 aa23.93■■□□□ 1.42
SMPD1-205ENST00000531303 SETDB2Q96T68 719 aa23.93■■□□□ 1.42
SMPD1-205ENST00000531303 RGL2O15211 777 aa23.92■■□□□ 1.42
SMPD1-205ENST00000531303 PDGFDQ9GZP0 370 aaPredicted RBP23.92■■□□□ 1.42
SMPD1-205ENST00000531303 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
SMPD1-205ENST00000531303 QSER1Q2KHR3 1735 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 GNAI2P04899 355 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 PARP10Q53GL7 1025 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 ERICH6BQ5W0A0 696 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 FAM89AQ96GI7 184 aa23.91■■□□□ 1.42
SMPD1-205ENST00000531303 LRRFIP2Q9Y608 721 aaKnown RBP23.91■■□□□ 1.42
SMPD1-205ENST00000531303 H7C1W4 665 aa23.9■■□□□ 1.42
SMPD1-205ENST00000531303 NFIXQ14938 502 aa23.9■■□□□ 1.42
SMPD1-205ENST00000531303 SYNE4Q8N205 404 aa23.9■■□□□ 1.42
SMPD1-205ENST00000531303 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
SMPD1-205ENST00000531303 SUCLG2Q96I99 432 aa23.89■■□□□ 1.42
SMPD1-205ENST00000531303 PCDHB15Q9Y5E8 787 aa23.89■■□□□ 1.42
SMPD1-205ENST00000531303 PPP1R42Q7Z4L9 355 aa23.88■■□□□ 1.41
SMPD1-205ENST00000531303 ZBTB38Q8NAP3 1195 aaPredicted RBP23.88■■□□□ 1.41
SMPD1-205ENST00000531303 UTYO14607 1347 aa23.88■■□□□ 1.41
SMPD1-205ENST00000531303 PCCAP05165 728 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-205ENST00000531303 AAMPQ13685 434 aa23.87■■□□□ 1.41
SMPD1-205ENST00000531303 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
SMPD1-205ENST00000531303 PPP4R2Q9NY27 417 aa23.87■■□□□ 1.41
SMPD1-205ENST00000531303 CASP7P55210 303 aa23.87■■□□□ 1.41
SMPD1-205ENST00000531303 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-205ENST00000531303 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
SMPD1-205ENST00000531303 NLGN1Q8N2Q7 840 aa23.87■■□□□ 1.41
SMPD1-205ENST00000531303 NTSR2O95665 410 aa23.86■■□□□ 1.41
SMPD1-205ENST00000531303 GTF2E1P29083 439 aaPredicted RBP23.86■■□□□ 1.41
SMPD1-205ENST00000531303 IBTKQ9P2D0 1353 aaPredicted RBP23.85■■□□□ 1.41
SMPD1-205ENST00000531303 NPHP1O15259 732 aa23.85■■□□□ 1.41
SMPD1-205ENST00000531303 TM4SF1P30408 202 aa23.85■■□□□ 1.41
SMPD1-205ENST00000531303 B4GALNT3Q6L9W6 998 aa23.85■■□□□ 1.41
SMPD1-205ENST00000531303 HDAC5Q9UQL6 1122 aa23.85■■□□□ 1.41
SMPD1-205ENST00000531303 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
SMPD1-205ENST00000531303 PSDA5PKW4 1024 aaPredicted RBP23.84■■□□□ 1.41
SMPD1-205ENST00000531303 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 KAZALD1Q96I82 304 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 CCDC136Q96JN2 1154 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 CARMIL3Q8ND23 1372 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 COL24A1Q17RW2 1714 aa23.84■■□□□ 1.41
SMPD1-205ENST00000531303 IRS4O14654 1257 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-205ENST00000531303 DDR1Q08345 913 aa23.83■■□□□ 1.41
SMPD1-205ENST00000531303 ERFEQ4G0M1 354 aa23.83■■□□□ 1.41
SMPD1-205ENST00000531303 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
SMPD1-205ENST00000531303 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
SMPD1-205ENST00000531303 CEP85Q6P2H3 762 aa23.82■■□□□ 1.4
SMPD1-205ENST00000531303 TPTE2Q6XPS3 522 aa23.82■■□□□ 1.4
SMPD1-205ENST00000531303 NYXQ9GZU5 481 aa23.82■■□□□ 1.4
SMPD1-205ENST00000531303 SERPINB2P05120 415 aa23.81■■□□□ 1.4
SMPD1-205ENST00000531303 MMP10P09238 476 aa23.81■■□□□ 1.4
SMPD1-205ENST00000531303 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
SMPD1-205ENST00000531303 POLRMTO00411 1230 aaKnown RBP23.8■■□□□ 1.4
SMPD1-205ENST00000531303 SIRT2Q8IXJ6 389 aa23.8■■□□□ 1.4
SMPD1-205ENST00000531303 ANKRD44Q8N8A2 993 aa23.8■■□□□ 1.4
SMPD1-205ENST00000531303 CNBD1Q8NA66 436 aa23.8■■□□□ 1.4
SMPD1-205ENST00000531303 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
SMPD1-205ENST00000531303 ZBTB7AO95365 584 aa23.79■■□□□ 1.4
SMPD1-205ENST00000531303 FOXO4P98177 505 aa23.79■■□□□ 1.4
SMPD1-205ENST00000531303 ATP8B2P98198 1209 aa23.79■■□□□ 1.4
SMPD1-205ENST00000531303 RPAP2Q8IXW5 612 aaPredicted RBP23.79■■□□□ 1.4
SMPD1-205ENST00000531303 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
SMPD1-205ENST00000531303 PARP3Q9Y6F1 533 aa23.79■■□□□ 1.4
SMPD1-205ENST00000531303 PNMA6EA0A0J9YXQ4 647 aa23.78■■□□□ 1.4
SMPD1-205ENST00000531303 LMBR1LQ6UX01 489 aa23.78■■□□□ 1.4
SMPD1-205ENST00000531303 ABCC12Q96J65 1359 aa23.77■■□□□ 1.4
SMPD1-205ENST00000531303 MYH3P11055 1940 aa23.77■■□□□ 1.4
SMPD1-205ENST00000531303 SRGAP3O43295 1099 aa23.77■■□□□ 1.4
SMPD1-205ENST00000531303 IGHDP01880 384 aa23.77■■□□□ 1.4
SMPD1-205ENST00000531303 SLC16A10Q8TF71 515 aa23.77■■□□□ 1.4
SMPD1-205ENST00000531303 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
SMPD1-205ENST00000531303 PDE8AO60658 829 aa23.76■■□□□ 1.39
SMPD1-205ENST00000531303 PRR5LQ6MZQ0 368 aa23.76■■□□□ 1.39
SMPD1-205ENST00000531303 PLA2G12BQ9BX93 195 aa23.76■■□□□ 1.39
SMPD1-205ENST00000531303 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
SMPD1-205ENST00000531303 ATF5Q9Y2D1 282 aaPredicted RBP23.75■■□□□ 1.39
SMPD1-205ENST00000531303 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
SMPD1-205ENST00000531303 CTSWP56202 376 aa23.75■■□□□ 1.39
SMPD1-205ENST00000531303 ST5P78524 1137 aa23.75■■□□□ 1.39
SMPD1-205ENST00000531303 HMMRO75330 724 aa23.74■■□□□ 1.39
SMPD1-205ENST00000531303 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
SMPD1-205ENST00000531303 RABL6Q3YEC7 729 aaPredicted RBP23.74■■□□□ 1.39
SMPD1-205ENST00000531303 SLC10A5Q5PT55 438 aa23.74■■□□□ 1.39
SMPD1-205ENST00000531303 LAMB2P55268 1798 aa23.73■■□□□ 1.39
SMPD1-205ENST00000531303 HDAC1Q13547 482 aaPredicted RBP23.73■■□□□ 1.39
SMPD1-205ENST00000531303 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
SMPD1-205ENST00000531303 MTX1Q13505 466 aa23.72■■□□□ 1.39
SMPD1-205ENST00000531303 TTLL11Q8NHH1 800 aa23.72■■□□□ 1.39
SMPD1-205ENST00000531303 FAM161AQ3B820 660 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms