RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NGLY1Q96IV0 654 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
LRRK1-207ENST00000531270 GJB2P29033 226 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 HSP90AA4PQ58FG1 418 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 ZBTB9Q96C00 473 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 LRSAM1Q6UWE0 723 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
LRRK1-207ENST00000531270 SSFA2P28290 1259 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 PDE4BQ07343 736 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
LRRK1-207ENST00000531270 FCHSD2O94868 740 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
LRRK1-207ENST00000531270 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.28
LRRK1-207ENST00000531270 CTAGE5O15320 804 aa16.77■□□□□ 0.28
LRRK1-207ENST00000531270 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
LRRK1-207ENST00000531270 GSTA5Q7RTV2 222 aa16.77■□□□□ 0.28
LRRK1-207ENST00000531270 AFMP43652 599 aa16.77■□□□□ 0.27
LRRK1-207ENST00000531270 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.27
LRRK1-207ENST00000531270 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.27
LRRK1-207ENST00000531270 STX1AQ16623 288 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
LRRK1-207ENST00000531270 BAG3O95817 575 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
LRRK1-207ENST00000531270 POTEB2H3BUK9 544 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 KRT13P13646 458 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 PLS1Q14651 629 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 AKR1B10O60218 316 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 CFAP58Q5T655 872 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 STX8Q9UNK0 236 aa16.76■□□□□ 0.27
LRRK1-207ENST00000531270 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
LRRK1-207ENST00000531270 N4BP3O15049 544 aa16.75■□□□□ 0.27
LRRK1-207ENST00000531270 HMGB2P26583 209 aaKnown RBP16.75■□□□□ 0.27
LRRK1-207ENST00000531270 GNG11P61952 73 aa16.75■□□□□ 0.27
LRRK1-207ENST00000531270 TPD52P55327 224 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-207ENST00000531270 TTF1Q15361 905 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-207ENST00000531270 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
LRRK1-207ENST00000531270 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-207ENST00000531270 PICALMQ13492 652 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 RRP9O43818 475 aaKnown RBP16.74■□□□□ 0.27
LRRK1-207ENST00000531270 DAAM2Q86T65 1068 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 LDHCP07864 332 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 ARID5AQ03989 594 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
LRRK1-207ENST00000531270 CCDC50Q8IVM0 306 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
LRRK1-207ENST00000531270 KIF4AO95239 1232 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 RFC4P35249 363 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 PTGS1P23219 599 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 TAF12Q16514 161 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 ADCY5O95622 1261 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 GSDMDP57764 484 aa16.73■□□□□ 0.27
LRRK1-207ENST00000531270 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 MAP3K2Q9Y2U5 619 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 EXOC5O00471 708 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CALM1P0DP23 149 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CALM2P0DP24 149 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 CALM3P0DP25 149 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 ERMNQ8TAM6 284 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
LRRK1-207ENST00000531270 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
LRRK1-207ENST00000531270 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
LRRK1-207ENST00000531270 SELENOSQ9BQE4 189 aa16.72■□□□□ 0.27
LRRK1-207ENST00000531270 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 STAT6P42226 847 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 NAP1L3Q99457 506 aaPredicted RBP16.71■□□□□ 0.27
LRRK1-207ENST00000531270 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 WIZO95785 1651 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 CEP135Q66GS9 1140 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 ZBTB16Q05516 673 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
LRRK1-207ENST00000531270 HSPA4P34932 840 aa16.71■□□□□ 0.26
LRRK1-207ENST00000531270 ST5P78524 1137 aa16.71■□□□□ 0.26
LRRK1-207ENST00000531270 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms