RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 COL13A1Q5TAT6 717 aaPredicted RBP15.75■□□□□ 0.11
VPS51-210ENST00000531146 GIGYF2Q6Y7W6 1299 aaKnown RBP15.75■□□□□ 0.11
VPS51-210ENST00000531146 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
VPS51-210ENST00000531146 TAF1DQ9H5J8 278 aaPredicted RBP15.75■□□□□ 0.11
VPS51-210ENST00000531146 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
VPS51-210ENST00000531146 COL4A5P29400 1685 aa15.74■□□□□ 0.11
VPS51-210ENST00000531146 IQCA1LA6NCM1 817 aa15.74■□□□□ 0.11
VPS51-210ENST00000531146 NTSR2O95665 410 aa15.74■□□□□ 0.11
VPS51-210ENST00000531146 EIF2S2P20042 333 aaKnown RBP15.74■□□□□ 0.11
VPS51-210ENST00000531146 HOXA10P31260 410 aaPredicted RBP15.74■□□□□ 0.11
VPS51-210ENST00000531146 TMPOP42166 694 aaKnown RBP15.74■□□□□ 0.11
VPS51-210ENST00000531146 FZD9O00144 591 aa15.73■□□□□ 0.11
VPS51-210ENST00000531146 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
VPS51-210ENST00000531146 PSMD1Q99460 953 aa15.73■□□□□ 0.11
VPS51-210ENST00000531146 LDHDQ86WU2 507 aa15.72■□□□□ 0.11
VPS51-210ENST00000531146 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
VPS51-210ENST00000531146 PASKQ96RG2 1323 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 HSPA1AP0DMV8 641 aaKnown RBP15.71■□□□□ 0.11
VPS51-210ENST00000531146 HSPA1BP0DMV9 641 aaKnown RBP15.71■□□□□ 0.11
VPS51-210ENST00000531146 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 EAPPQ56P03 285 aaPredicted RBP15.71■□□□□ 0.11
VPS51-210ENST00000531146 NECTIN2Q92692 538 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
VPS51-210ENST00000531146 HACL1Q9UJ83 578 aa15.71■□□□□ 0.11
VPS51-210ENST00000531146 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
VPS51-210ENST00000531146 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
VPS51-210ENST00000531146 EPHX2P34913 555 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
VPS51-210ENST00000531146 RBM17Q96I25 401 aaKnown RBP15.7■□□□□ 0.1
VPS51-210ENST00000531146 PPEF1O14829 653 aaPredicted RBP15.69■□□□□ 0.1
VPS51-210ENST00000531146 ITGBL1O95965 494 aaPredicted RBP15.69■□□□□ 0.1
VPS51-210ENST00000531146 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
VPS51-210ENST00000531146 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
VPS51-210ENST00000531146 GPC2Q8N158 579 aa15.69■□□□□ 0.1
VPS51-210ENST00000531146 CHL1O00533 1208 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 AIMP1Q12904 312 aaKnown RBP15.68■□□□□ 0.1
VPS51-210ENST00000531146 SLC10A5Q5PT55 438 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
VPS51-210ENST00000531146 TRIM35Q9UPQ4 493 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
VPS51-210ENST00000531146 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
VPS51-210ENST00000531146 NLRP3Q96P20 1036 aa15.67■□□□□ 0.1
VPS51-210ENST00000531146 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
VPS51-210ENST00000531146 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
VPS51-210ENST00000531146 CNTNAP1P78357 1384 aa15.66■□□□□ 0.1
VPS51-210ENST00000531146 MAP1SQ66K74 1059 aaPredicted RBP15.66■□□□□ 0.1
VPS51-210ENST00000531146 NLRP10Q86W26 655 aa15.66■□□□□ 0.1
VPS51-210ENST00000531146 LARGE2Q8N3Y3 721 aa15.66■□□□□ 0.1
VPS51-210ENST00000531146 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
VPS51-210ENST00000531146 LAMB2P55268 1798 aa15.66■□□□□ 0.1
VPS51-210ENST00000531146 ABCC4O15439 1325 aa15.66■□□□□ 0.1
VPS51-210ENST00000531146 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
VPS51-210ENST00000531146 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
VPS51-210ENST00000531146 GRIPAP1Q4V328 841 aa15.65■□□□□ 0.1
VPS51-210ENST00000531146 PNMA8AQ86V59 439 aaPredicted RBP15.65■□□□□ 0.1
VPS51-210ENST00000531146 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
VPS51-210ENST00000531146 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
VPS51-210ENST00000531146 ADAMTS8Q9UP79 889 aa15.65■□□□□ 0.1
VPS51-210ENST00000531146 ATP6V0A2Q9Y487 856 aa15.65■□□□□ 0.1
VPS51-210ENST00000531146 LAS1LQ9Y4W2 734 aaKnown RBP15.65■□□□□ 0.1
VPS51-210ENST00000531146 TMEM88BA6NKF7 163 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 EPS15P42566 896 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 SCNN1DP51172 638 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 AOC3Q16853 763 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 TNS4Q8IZW8 715 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 CHPF2Q9P2E5 772 aa15.64■□□□□ 0.09
VPS51-210ENST00000531146 TAF1P21675 1872 aa15.63■□□□□ 0.09
VPS51-210ENST00000531146 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
VPS51-210ENST00000531146 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
VPS51-210ENST00000531146 HSP90AB3PQ58FF7 597 aa15.63■□□□□ 0.09
VPS51-210ENST00000531146 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
VPS51-210ENST00000531146 VEGFBP49765 207 aa15.62■□□□□ 0.09
VPS51-210ENST00000531146 NIM1KQ8IY84 436 aa15.62■□□□□ 0.09
VPS51-210ENST00000531146 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
VPS51-210ENST00000531146 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
VPS51-210ENST00000531146 FMR1Q06787 632 aaKnown RBP eCLIP15.61■□□□□ 0.092e-8■□□□□ 10.4
VPS51-210ENST00000531146 HDGFL1Q5TGJ6 251 aa15.61■□□□□ 0.09
VPS51-210ENST00000531146 RTFDC1Q9BY42 306 aaPredicted RBP15.61■□□□□ 0.09
VPS51-210ENST00000531146 SH3TC1Q8TE82 1336 aa15.61■□□□□ 0.09
VPS51-210ENST00000531146 FOXN1O15353 648 aa15.6■□□□□ 0.09
VPS51-210ENST00000531146 CAPN15O75808 1086 aa15.6■□□□□ 0.09
VPS51-210ENST00000531146 BBOX1O75936 387 aa15.6■□□□□ 0.09
VPS51-210ENST00000531146 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
VPS51-210ENST00000531146 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
VPS51-210ENST00000531146 TMX4Q9H1E5 349 aaPredicted RBP15.6■□□□□ 0.09
VPS51-210ENST00000531146 HOXB7P09629 217 aa15.59■□□□□ 0.09
VPS51-210ENST00000531146 CXCL9Q07325 125 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms