RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ERBB4Q15303 1308 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 NTSR2O95665 410 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 TMPOP42166 694 aaKnown RBP27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 RALBP1Q15311 655 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 C3orf67Q6ZVT6 689 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 CCDC146Q8IYE0 955 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 NECTIN2Q92692 538 aa27.28■■□□□ 1.96
TSPAN4-219ENST00000530404 TCERG1O14776 1098 aaKnown RBP27.27■■□□□ 1.96
TSPAN4-219ENST00000530404 PDIA6Q15084 440 aa27.27■■□□□ 1.96
TSPAN4-219ENST00000530404 EAPPQ56P03 285 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-219ENST00000530404 LRP10Q7Z4F1 713 aa27.27■■□□□ 1.96
TSPAN4-219ENST00000530404 LTBP1Q14766 1721 aa27.27■■□□□ 1.96
TSPAN4-219ENST00000530404 RNF123Q5XPI4 1314 aa27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 HSPA1AP0DMV8 641 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 HSPA1BP0DMV9 641 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 NEUROD2Q15784 382 aa27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 LDHDQ86WU2 507 aa27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 MKRN1Q9UHC7 482 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-219ENST00000530404 FZD9O00144 591 aa27.25■■□□□ 1.95
TSPAN4-219ENST00000530404 DDX10Q13206 875 aaKnown RBP27.25■■□□□ 1.95
TSPAN4-219ENST00000530404 PSMD1Q99460 953 aa27.24■■□□□ 1.95
TSPAN4-219ENST00000530404 CREBZFQ9NS37 354 aa27.24■■□□□ 1.95
TSPAN4-219ENST00000530404 HACL1Q9UJ83 578 aa27.24■■□□□ 1.95
TSPAN4-219ENST00000530404 HOXA10P31260 410 aaPredicted RBP27.23■■□□□ 1.95
TSPAN4-219ENST00000530404 PPP1R42Q7Z4L9 355 aa27.23■■□□□ 1.95
TSPAN4-219ENST00000530404 RBM17Q96I25 401 aaKnown RBP27.23■■□□□ 1.95
TSPAN4-219ENST00000530404 PASKQ96RG2 1323 aa27.22■■□□□ 1.95
TSPAN4-219ENST00000530404 PPEF1O14829 653 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-219ENST00000530404 EPHX2P34913 555 aa27.22■■□□□ 1.95
TSPAN4-219ENST00000530404 KRT24Q2M2I5 525 aa27.22■■□□□ 1.95
TSPAN4-219ENST00000530404 CLEC11AQ9Y240 323 aa27.22■■□□□ 1.95
TSPAN4-219ENST00000530404 LMOD3Q0VAK6 560 aa27.21■■□□□ 1.95
TSPAN4-219ENST00000530404 AIMP1Q12904 312 aaKnown RBP27.21■■□□□ 1.95
TSPAN4-219ENST00000530404 JDP2Q8WYK2 163 aa27.21■■□□□ 1.95
TSPAN4-219ENST00000530404 GJA3Q9Y6H8 435 aa27.21■■□□□ 1.95
TSPAN4-219ENST00000530404 DDX60Q8IY21 1712 aaKnown RBP27.21■■□□□ 1.95
TSPAN4-219ENST00000530404 MYBBP1AQ9BQG0 1328 aaKnown RBP27.2■■□□□ 1.95
TSPAN4-219ENST00000530404 PARP10Q53GL7 1025 aa27.2■■□□□ 1.94
TSPAN4-219ENST00000530404 CRAMP1Q96RY5 1269 aa27.2■■□□□ 1.94
TSPAN4-219ENST00000530404 TRPM7Q96QT4 1865 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 CC2D2BQ6DHV5 1058 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 COPS6Q7L5N1 327 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 GPC2Q8N158 579 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 ZNF428Q96B54 188 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 UTP14AQ9BVJ6 771 aaKnown RBP27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 BABAM1Q9NWV8 329 aa27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 LAS1LQ9Y4W2 734 aaKnown RBP27.19■■□□□ 1.94
TSPAN4-219ENST00000530404 XAGE3Q8WTP9 111 aa27.18■■□□□ 1.94
TSPAN4-219ENST00000530404 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
TSPAN4-219ENST00000530404 ITGBL1O95965 494 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-219ENST00000530404 EIF6P56537 245 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-219ENST00000530404 LARGE2Q8N3Y3 721 aa27.17■■□□□ 1.94
TSPAN4-219ENST00000530404 MAP1SQ66K74 1059 aaPredicted RBP27.16■■□□□ 1.94
TSPAN4-219ENST00000530404 ABCC4O15439 1325 aa27.16■■□□□ 1.94
TSPAN4-219ENST00000530404 CNTNAP1P78357 1384 aa27.15■■□□□ 1.94
TSPAN4-219ENST00000530404 CAPN15O75808 1086 aa27.15■■□□□ 1.94
TSPAN4-219ENST00000530404 TNS4Q8IZW8 715 aa27.15■■□□□ 1.94
TSPAN4-219ENST00000530404 TRIM35Q9UPQ4 493 aa27.15■■□□□ 1.94
TSPAN4-219ENST00000530404 HCLS1P14317 486 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-219ENST00000530404 TMEM88BA6NKF7 163 aa27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 WDR43Q15061 677 aaKnown RBP eCLIP27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 SLC10A5Q5PT55 438 aa27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 PNMA8AQ86V59 439 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 NLRP10Q86W26 655 aa27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 RUNDC1Q96C34 613 aa27.13■■□□□ 1.93
TSPAN4-219ENST00000530404 CHL1O00533 1208 aa27.12■■□□□ 1.93
TSPAN4-219ENST00000530404 AOC3Q16853 763 aa27.12■■□□□ 1.93
TSPAN4-219ENST00000530404 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
TSPAN4-219ENST00000530404 DDX21Q9NR30 783 aaKnown RBP eCLIP27.12■■□□□ 1.93
TSPAN4-219ENST00000530404 CHPF2Q9P2E5 772 aa27.12■■□□□ 1.93
TSPAN4-219ENST00000530404 PPIP5K2O43314 1243 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 GRIPAP1Q4V328 841 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 HSP90AB3PQ58FF7 597 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 NIM1KQ8IY84 436 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 ADAMTS8Q9UP79 889 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 ATP6V0A2Q9Y487 856 aa27.11■■□□□ 1.93
TSPAN4-219ENST00000530404 LMOD1P29536 600 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 EPS15P42566 896 aa27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 SCNN1DP51172 638 aa27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 TCIRG1Q13488 830 aa27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 TRMT112Q9UI30 125 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 LRRC37AA6NMS7 1700 aa27.1■■□□□ 1.93
TSPAN4-219ENST00000530404 VEGFBP49765 207 aa27.09■■□□□ 1.93
TSPAN4-219ENST00000530404 TMX4Q9H1E5 349 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-219ENST00000530404 FMR1Q06787 632 aaKnown RBP eCLIP27.07■■□□□ 1.92
TSPAN4-219ENST00000530404 HDGFL1Q5TGJ6 251 aa27.07■■□□□ 1.92
TSPAN4-219ENST00000530404 COL4A1P02462 1669 aa27.07■■□□□ 1.92
TSPAN4-219ENST00000530404 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
TSPAN4-219ENST00000530404 FOXN1O15353 648 aa27.05■■□□□ 1.92
TSPAN4-219ENST00000530404 DUOX1Q9NRD9 1551 aa27.05■■□□□ 1.92
TSPAN4-219ENST00000530404 DPP8Q6V1X1 898 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-219ENST00000530404 DDX46Q7L014 1031 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-219ENST00000530404 POLR2AP24928 1970 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-219ENST00000530404 ATP5J2-PTCD1G3V325 749 aa27.03■■□□□ 1.92
TSPAN4-219ENST00000530404 SP8Q8IXZ3 490 aa27.03■■□□□ 1.92
TSPAN4-219ENST00000530404 MPNDQ8N594 471 aa27.03■■□□□ 1.92
TSPAN4-219ENST00000530404 BBOX1O75936 387 aa27.02■■□□□ 1.92
TSPAN4-219ENST00000530404 CXCL9Q07325 125 aa27.02■■□□□ 1.92
TSPAN4-219ENST00000530404 GRAPQ13588 217 aa27.02■■□□□ 1.92
TSPAN4-219ENST00000530404 SUPT20HQ8NEM7 779 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms