RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ANKRD31Q8N7Z5 1873 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 KLRG2A4D1S0 409 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-216ENST00000528739 NFKBIEO00221 500 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-216ENST00000528739 CCDC93Q567U6 631 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 IL16Q14005 1332 aa18.4■□□□□ 0.54
CAPN1-216ENST00000528739 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.54
CAPN1-216ENST00000528739 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
CAPN1-216ENST00000528739 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
CAPN1-216ENST00000528739 TMX4Q9H1E5 349 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-216ENST00000528739 NUP98P52948 1817 aa18.38■□□□□ 0.53
CAPN1-216ENST00000528739 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-216ENST00000528739 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-216ENST00000528739 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-216ENST00000528739 KDM2BQ8NHM5 1336 aa18.38■□□□□ 0.53
CAPN1-216ENST00000528739 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-216ENST00000528739 SYNE4Q8N205 404 aa18.37■□□□□ 0.53
CAPN1-216ENST00000528739 MYD88Q99836 296 aa18.37■□□□□ 0.53
CAPN1-216ENST00000528739 SH3TC1Q8TE82 1336 aa18.37■□□□□ 0.53
CAPN1-216ENST00000528739 COL11A2P13942 1736 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-216ENST00000528739 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
CAPN1-216ENST00000528739 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
CAPN1-216ENST00000528739 NMRK2Q9NPI5 230 aa18.36■□□□□ 0.53
CAPN1-216ENST00000528739 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
CAPN1-216ENST00000528739 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
CAPN1-216ENST00000528739 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 PRELPP51888 382 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 RTKN2Q8IZC4 609 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 FAM89AQ96GI7 184 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
CAPN1-216ENST00000528739 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-216ENST00000528739 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
CAPN1-216ENST00000528739 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
CAPN1-216ENST00000528739 DDX46Q7L014 1031 aaKnown RBP18.34■□□□□ 0.53
CAPN1-216ENST00000528739 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
CAPN1-216ENST00000528739 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
CAPN1-216ENST00000528739 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-216ENST00000528739 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
CAPN1-216ENST00000528739 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
CAPN1-216ENST00000528739 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-216ENST00000528739 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
CAPN1-216ENST00000528739 SLX4Q8IY92 1834 aa18.33■□□□□ 0.52
CAPN1-216ENST00000528739 KIF3CO14782 793 aa18.32■□□□□ 0.52
CAPN1-216ENST00000528739 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 CC2D2BQ6DHV5 1058 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
CAPN1-216ENST00000528739 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-216ENST00000528739 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
CAPN1-216ENST00000528739 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
CAPN1-216ENST00000528739 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
CAPN1-216ENST00000528739 RIC1Q4ADV7 1423 aa18.3■□□□□ 0.52
CAPN1-216ENST00000528739 ABCC4O15439 1325 aa18.29■□□□□ 0.52
CAPN1-216ENST00000528739 VAMP4O75379 141 aa18.29■□□□□ 0.52
CAPN1-216ENST00000528739 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
CAPN1-216ENST00000528739 TRIM28Q13263 835 aaKnown RBP18.29■□□□□ 0.52
CAPN1-216ENST00000528739 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-216ENST00000528739 G2E3Q7L622 706 aa18.29■□□□□ 0.52
CAPN1-216ENST00000528739 CCDC191Q8NCU4 936 aa18.29■□□□□ 0.52
CAPN1-216ENST00000528739 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
CAPN1-216ENST00000528739 BBOX1O75936 387 aa18.28■□□□□ 0.52
CAPN1-216ENST00000528739 TOMM70O94826 608 aa18.28■□□□□ 0.52
CAPN1-216ENST00000528739 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
CAPN1-216ENST00000528739 ZBTB38Q8NAP3 1195 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-216ENST00000528739 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
CAPN1-216ENST00000528739 FLIIQ13045 1269 aa18.27■□□□□ 0.52
CAPN1-216ENST00000528739 GRAPQ13588 217 aa18.27■□□□□ 0.52
CAPN1-216ENST00000528739 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
CAPN1-216ENST00000528739 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-216ENST00000528739 DDNO94850 711 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-216ENST00000528739 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-216ENST00000528739 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CAPN1-216ENST00000528739 LARGE2Q8N3Y3 721 aa18.26■□□□□ 0.51
CAPN1-216ENST00000528739 ATP6V0A2Q9Y487 856 aa18.26■□□□□ 0.51
CAPN1-216ENST00000528739 SBF1O95248 1867 aa18.25■□□□□ 0.51
CAPN1-216ENST00000528739 DPP8Q6V1X1 898 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-216ENST00000528739 SLC51AQ86UW1 340 aa18.25■□□□□ 0.51
CAPN1-216ENST00000528739 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-216ENST00000528739 PSMD1Q99460 953 aa18.25■□□□□ 0.51
CAPN1-216ENST00000528739 ANKRD36CQ5JPF3 1778 aa18.25■□□□□ 0.51
CAPN1-216ENST00000528739 PCCAP05165 728 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-216ENST00000528739 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
CAPN1-216ENST00000528739 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
CAPN1-216ENST00000528739 MPNDQ8N594 471 aa18.24■□□□□ 0.51
CAPN1-216ENST00000528739 E9PSI1 815 aa18.23■□□□□ 0.51
CAPN1-216ENST00000528739 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
CAPN1-216ENST00000528739 PDE8AO60658 829 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms