RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 AMOTQ4VCS5 1084 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 NOL7Q9UMY1 257 aaKnown RBP8.93□□□□□ -0.98
C11orf54-207ENST00000528288 TUBGCP6Q96RT7 1819 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 CCDC171Q6TFL3 1326 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
C11orf54-207ENST00000528288 RUFY2Q8WXA3 655 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 GPATCH3Q96I76 525 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 TTC41PQ6P2S7 1318 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 OFD1O75665 1012 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 UBE3BQ7Z3V4 1068 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 EVI5LQ96CN4 794 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 TTC12Q9H892 705 aaPredicted RBP8.93□□□□□ -0.98
C11orf54-207ENST00000528288 MTMR6Q9Y217 621 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.93□□□□□ -0.98
C11orf54-207ENST00000528288 PXDNLA1KZ92 1463 aa8.93□□□□□ -0.98
C11orf54-207ENST00000528288 SLC27A2O14975 620 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 ZNF790Q6PG37 636 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 CDC37L1Q7L3B6 337 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 RAPGEF4Q8WZA2 1011 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 SYAP1Q96A49 352 aaPredicted RBP8.92□□□□□ -0.98
C11orf54-207ENST00000528288 DDX11Q96FC9 970 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 ALDH1L1O75891 902 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 HOXB7P09629 217 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 ZKSCAN1P17029 563 aaPredicted RBP8.92□□□□□ -0.98
C11orf54-207ENST00000528288 NECTIN1Q15223 517 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 DDX21Q9NR30 783 aaKnown RBP eCLIP8.92□□□□□ -0.98
C11orf54-207ENST00000528288 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 ZKSCAN5Q9Y2L8 839 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.92□□□□□ -0.98
C11orf54-207ENST00000528288 FER1L4A9Z1Z3 1794 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 NFAT5O94916 1531 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 TFCP2Q12800 502 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 LARP1BQ659C4 914 aaKnown RBP8.92□□□□□ -0.98
C11orf54-207ENST00000528288 FAM13BQ9NYF5 915 aa8.92□□□□□ -0.98
C11orf54-207ENST00000528288 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
C11orf54-207ENST00000528288 TSC1Q92574 1164 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 ZSWIM6Q9HCJ5 1215 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 NEURL1BA8MQ27 555 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 ADCY5O95622 1261 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 DDX58O95786 925 aaKnown RBP8.91□□□□□ -0.98
C11orf54-207ENST00000528288 MTX1Q13505 466 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 SPC24Q8NBT2 197 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 CEBPZQ03701 1054 aaKnown RBP8.91□□□□□ -0.98
C11orf54-207ENST00000528288 CCDC183Q5T5S1 534 aa8.91□□□□□ -0.98
C11orf54-207ENST00000528288 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
C11orf54-207ENST00000528288 JAK2O60674 1132 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 NEXNQ0ZGT2 675 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 GCKRQ14397 625 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 DNTTIP2Q5QJE6 756 aaKnown RBP8.9□□□□□ -0.98
C11orf54-207ENST00000528288 VPS53Q5VIR6 699 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 CKAP2LQ8IYA6 745 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 NAP1L2Q9ULW6 460 aaPredicted RBP8.9□□□□□ -0.98
C11orf54-207ENST00000528288 A0A0G2JLW4 131 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 AP5Z1O43299 807 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
C11orf54-207ENST00000528288 DBNDD2Q9BQY9 259 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 CCDC39Q9UFE4 941 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 DBNLQ9UJU6 430 aaKnown RBP8.9□□□□□ -0.98
C11orf54-207ENST00000528288 UBE2HP62256 183 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
C11orf54-207ENST00000528288 BLOC1S2Q6QNY1 142 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 NEUROD6Q96NK8 337 aa8.9□□□□□ -0.98
C11orf54-207ENST00000528288 CACNA1FO60840 1977 aa8.9□□□□□ -0.99
C11orf54-207ENST00000528288 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.99
C11orf54-207ENST00000528288 LIG1P18858 919 aa8.9□□□□□ -0.99
C11orf54-207ENST00000528288 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.99
C11orf54-207ENST00000528288 MAP4K1Q92918 833 aa8.9□□□□□ -0.99
C11orf54-207ENST00000528288 SLC52A2Q9HAB3 445 aa8.9□□□□□ -0.99
C11orf54-207ENST00000528288 A0A087WZG4 1122 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.89□□□□□ -0.99
C11orf54-207ENST00000528288 TTC6Q86TZ1 520 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 ERBB3P21860 1342 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 UQCRHLA0A096LP55 91 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 UQCRHP07919 91 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
C11orf54-207ENST00000528288 IL17RAQ96F46 866 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 PHF14O94880 888 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 CHST3Q7LGC8 479 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 TTC5Q8N0Z6 440 aa8.89□□□□□ -0.99
C11orf54-207ENST00000528288 PHKG2P15735 406 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 TOB2Q14106 344 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 NPHP3Q7Z494 1330 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 COL15A1P39059 1388 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 A0A087WWV3 80 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 CYP27B1O15528 508 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 TIMM10P62072 90 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 LMBR1LQ6UX01 489 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 METTL22Q9BUU2 404 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 ADGRL3Q9HAR2 1447 aa8.88□□□□□ -0.99
C11orf54-207ENST00000528288 ZNF500O60304 480 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
C11orf54-207ENST00000528288 FGD1P98174 961 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 TNNI3KQ59H18 835 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 FPGT-TNNI3KV9GXZ4 949 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms