RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 TOGARAM1Q9Y4F4 1720 aa5.82□□□□□ -1.48
CHD7-205ENST00000527825 ANKRD36BQ8N2N9 1353 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 CLSPNQ9HAW4 1339 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.81□□□□□ -1.48
CHD7-205ENST00000527825 A0A0G2JLW4 131 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 IRF6O14896 467 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 ZMYND10O75800 440 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 SRPK2P78362 688 aaKnown RBP5.81□□□□□ -1.48
CHD7-205ENST00000527825 BEGAINQ9BUH8 593 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 ITGB4P16144 1822 aa5.81□□□□□ -1.48
CHD7-205ENST00000527825 CNTNAP1P78357 1384 aa5.8□□□□□ -1.48
CHD7-205ENST00000527825 DICER1Q9UPY3 1922 aaKnown RBP5.8□□□□□ -1.48
CHD7-205ENST00000527825 CFHP08603 1231 aa5.8□□□□□ -1.48
CHD7-205ENST00000527825 HSPA8P11142 646 aaKnown RBP5.8□□□□□ -1.48
CHD7-205ENST00000527825 ARHGEF25Q86VW2 580 aa5.8□□□□□ -1.48
CHD7-205ENST00000527825 KRI1Q8N9T8 703 aaKnown RBP5.8□□□□□ -1.48
CHD7-205ENST00000527825 V9GY48 417 aaPredicted RBP5.8□□□□□ -1.48
CHD7-205ENST00000527825 PDE4DIPQ5VU43 2346 aa5.8□□□□□ -1.48
CHD7-205ENST00000527825 C4AP0C0L4 1744 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 ZC3H4Q9UPT8 1303 aaKnown RBP5.79□□□□□ -1.48
CHD7-205ENST00000527825 CASP8AP2Q9UKL3 1982 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 GLTPD2A6NH11 291 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 ACTN4O43707 911 aaKnown RBP5.79□□□□□ -1.48
CHD7-205ENST00000527825 TLL1O43897 1013 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 SLC10A3P09131 477 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 MMP10P09238 476 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 GGCXP38435 758 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 MAP2K1Q02750 393 aaPredicted RBP5.79□□□□□ -1.48
CHD7-205ENST00000527825 KMT5BQ4FZB7 885 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 PRPF38BQ5VTL8 546 aaKnown RBP5.79□□□□□ -1.48
CHD7-205ENST00000527825 ERICH6Q7L0X2 663 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 PHOX2BQ99453 314 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 CCDC87Q9NVE4 849 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 RGPD2P0DJD1 1756 aa5.79□□□□□ -1.48
CHD7-205ENST00000527825 GFRA3O60609 400 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 DPEP1P16444 411 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 VEGFBP49765 207 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 LAPTM4AQ15012 233 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 DALRD3Q5D0E6 543 aaKnown RBP5.78□□□□□ -1.48
CHD7-205ENST00000527825 PIM2Q9P1W9 311 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 NFAT5O94916 1531 aa5.78□□□□□ -1.48
CHD7-205ENST00000527825 SSFA2P28290 1259 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 DIEXFQ68CQ4 756 aaKnown RBP5.77□□□□□ -1.49
CHD7-205ENST00000527825 SMIM5Q71RC9 77 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 ANKRD24Q8TF21 1146 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 NLRP7Q8WX94 980 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 CCDC102AQ96A19 550 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 GCC1Q96CN9 775 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 TMUB1Q9BVT8 246 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 PARP3Q9Y6F1 533 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 TNRC18O15417 2968 aaPredicted RBP5.77□□□□□ -1.49
CHD7-205ENST00000527825 NSD2O96028 1365 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 PALLDQ8WX93 1383 aa5.77□□□□□ -1.49
CHD7-205ENST00000527825 TMEM88BA6NKF7 163 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 RNF223E7ERA6 249 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 NRG2O14511 850 aaPredicted RBP5.76□□□□□ -1.49
CHD7-205ENST00000527825 LCE2BO14633 110 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 LMNB1P20700 586 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 DEFB115Q30KQ5 88 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 DCAF5Q96JK2 942 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 SCN4AP35499 1836 aa5.76□□□□□ -1.49
CHD7-205ENST00000527825 TRPM7Q96QT4 1865 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 S1PR4O95977 384 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 NLGN1Q8N2Q7 840 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 ZCRB1Q8TBF4 217 aaKnown RBP5.75□□□□□ -1.49
CHD7-205ENST00000527825 SMARCC1Q92922 1105 aaPredicted RBP5.75□□□□□ -1.49
CHD7-205ENST00000527825 MCOLN1Q9GZU1 580 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 CABP1Q9NZU7 370 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 DAXXQ9UER7 740 aaPredicted RBP5.75□□□□□ -1.49
CHD7-205ENST00000527825 DLEC1Q9Y238 1755 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 CACNA1SQ13698 1873 aa5.75□□□□□ -1.49
CHD7-205ENST00000527825 TTC21AQ8NDW8 1320 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 MON2Q7Z3U7 1717 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 NR1I2O75469 434 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 TMF1P82094 1093 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 RASSF7Q02833 373 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 GRM1Q13255 1194 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 DGKZQ13574 1117 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 MPRIPQ6WCQ1 1025 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 LTV1Q96GA3 475 aaPredicted RBP5.74□□□□□ -1.49
CHD7-205ENST00000527825 MPHOSPH9Q99550 1183 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 ABT1Q9ULW3 272 aaKnown RBP5.74□□□□□ -1.49
CHD7-205ENST00000527825 TTC21BQ7Z4L5 1316 aa5.74□□□□□ -1.49
CHD7-205ENST00000527825 WDR33Q9C0J8 1336 aaKnown RBP5.74□□□□□ -1.49
CHD7-205ENST00000527825 PPEF1O14829 653 aaPredicted RBP5.73□□□□□ -1.49
CHD7-205ENST00000527825 ADH1BP00325 375 aa5.73□□□□□ -1.49
CHD7-205ENST00000527825 SOX10P56693 466 aa5.73□□□□□ -1.49
CHD7-205ENST00000527825 MDM2Q00987 491 aaPredicted RBP5.73□□□□□ -1.49
CHD7-205ENST00000527825 PUS10Q3MIT2 529 aaKnown RBP5.73□□□□□ -1.49
CHD7-205ENST00000527825 DCAF11Q8TEB1 546 aa5.73□□□□□ -1.49
CHD7-205ENST00000527825 EMID1Q96A84 441 aaPredicted RBP5.73□□□□□ -1.49
CHD7-205ENST00000527825 PDZRN3Q9UPQ7 1066 aa5.73□□□□□ -1.49
CHD7-205ENST00000527825 MAP2P11137 1827 aaKnown RBP5.73□□□□□ -1.49
CHD7-205ENST00000527825 THSD7BQ9C0I4 1608 aa5.73□□□□□ -1.49
CHD7-205ENST00000527825 DDX11L8A8MPP1 907 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 DLL1O00548 723 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 KCNA3P22001 575 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 RFC4P35249 363 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 SLC19A1P41440 591 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 ECE1P42892 770 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms