RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	LGR6	Q9HBX8	967 aa		7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	MIS18A	Q9NYP9	233 aa		7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	C9orf78	Q9NZ63	289 aa	Predicted RBP	7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	RGS17	Q9UGC6	210 aa	Predicted RBP	7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	PCDHB15	Q9Y5E8	787 aa		7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	ATP10D	Q9P241	1426 aa		7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	CRYBG1	Q9Y4K1	1723 aa		7.75	□□□□□ -1.17
PABPC4-222	ENST00000527718	COL14A1	Q05707	1796 aa	Known RBP	7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	ANKRD45	Q5TZF3	282 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	RIC3	Q7Z5B4	369 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	NFATC2IP	Q8NCF5	419 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	LINS1	Q8NG48	757 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	NGLY1	Q96IV0	654 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	C8orf37	Q96NL8	207 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	DCTPP1	Q9H773	170 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	PDZRN3	Q9UPQ7	1066 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	AFF2	P51816	1311 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	MRC1	P22897	1456 aa		7.74	□□□□□ -1.17
PABPC4-222	ENST00000527718	TBC1D12	O60347	775 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	IGHD	P01880	384 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	HSP90AB3P	Q58FF7	597 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	BMP2KL	Q5H9B9	411 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	DDX54	Q8TDD1	881 aa	Known RBP	7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	SMARCC1	Q92922	1105 aa	Predicted RBP	7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	BCL2L12	Q9HB09	334 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	CHPF2	Q9P2E5	772 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	CACNA1F	O60840	1977 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	MEGF6	O75095	1541 aa		7.73	□□□□□ -1.17
PABPC4-222	ENST00000527718	HEG1	Q9ULI3	1381 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	RGS12	O14924	1447 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	DDB1	Q16531	1140 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	ZNF772	Q68DY9	489 aa	Predicted RBP	7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	KIF6	Q6ZMV9	814 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	IPO9	Q96P70	1041 aa	Known RBP	7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	KCNK17	Q96T54	332 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	LRRCC1	Q9C099	1032 aa		7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	CCDC9	Q9Y3X0	531 aa	Known RBP	7.72	□□□□□ -1.17
PABPC4-222	ENST00000527718	PI4KAP2	A4QPH2	592 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	ERC2	O15083	957 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	CYP27B1	O15528	508 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	ATP8B2	P98198	1209 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	OS9	Q13438	667 aa	Predicted RBP	7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	CEP85	Q6P2H3	762 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	POTEA	Q6S8J7	498 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	BARGIN	Q6ZT62	677 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	PI4KAP1	Q8N8J0	262 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	KIF1BP	Q96EK5	621 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	PKD1L3	Q7Z443	1732 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	AOX1	Q06278	1338 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	COL18A1	P39060	1754 aa		7.71	□□□□□ -1.18
PABPC4-222	ENST00000527718	PLCH1	Q4KWH8	1693 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	ADAMTS7	Q9UKP4	1686 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	NWD2	Q9ULI1	1742 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	KRT24	Q2M2I5	525 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	THSD4	Q6ZMP0	1018 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	HS6ST3	Q8IZP7	471 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	PLBD2	Q8NHP8	589 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	NECTIN2	Q92692	538 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	USP21	Q9UK80	565 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	MAP3K2	Q9Y2U5	619 aa		7.7	□□□□□ -1.18
PABPC4-222	ENST00000527718	KDM6A	O15550	1401 aa	Predicted RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	BCL9L	Q86UU0	1499 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	KDM3B	Q7LBC6	1761 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	SLIT2	O94813	1529 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718		A0A0G2JS52	829 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	GRM8	O00222	908 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	CDC45	O75419	566 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	REC8	O95072	547 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	MCC	P23508	829 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	FOSB	P53539	338 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	G3BP1	Q13283	466 aa	Known RBP eCLIP	7.69	□□□□□ -1.18	4e-7	■□□□□ 10.4
PABPC4-222	ENST00000527718	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	BEND3	Q5T5X7	828 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	ILDR2	Q71H61	639 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	TICAM2	Q86XR7	235 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	UNC5CL	Q8IV45	518 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	CLASRP	Q8N2M8	674 aa	Known RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	ZNF496	Q96IT1	587 aa	Predicted RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	MEIS3	Q99687	375 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	METTL22	Q9BUU2	404 aa	Predicted RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	LNPK	Q9C0E8	428 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	QTRT2	Q9H974	415 aa	Known RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	USP35	Q9P2H5	1018 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718	TNS2	Q63HR2	1409 aa		7.69	□□□□□ -1.18
PABPC4-222	ENST00000527718		A0A087WZG4	1122 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718		F6X3S4	739 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	HIP1	O00291	1037 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	SRGAP3	O43295	1099 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	EPB41L2	O43491	1005 aa	Known RBP	7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	MTX1	Q13505	466 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	CCDC191	Q8NCU4	936 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	CRISPLD2	Q9H0B8	497 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	TNN	Q9UQP3	1299 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	SPATA31A1	Q5TZJ5	1347 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	COL15A1	P39059	1388 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	ATRN	O75882	1429 aa		7.68	□□□□□ -1.18
PABPC4-222	ENST00000527718	NRAP	Q86VF7	1730 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms