RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 RUNDC1Q96C34 613 aa27.42■■□□□ 1.98
PKP3-205ENST00000527442 PLEKHF1Q96S99 279 aa27.42■■□□□ 1.98
PKP3-205ENST00000527442 ALDH1B1P30837 517 aa27.41■■□□□ 1.98
PKP3-205ENST00000527442 GTF2E1P29083 439 aaPredicted RBP27.4■■□□□ 1.98
PKP3-205ENST00000527442 PNMA8AQ86V59 439 aaPredicted RBP27.4■■□□□ 1.98
PKP3-205ENST00000527442 CRY2Q49AN0 593 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 NUTM1Q86Y26 1132 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 CCDC146Q8IYE0 955 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 CNTROBQ8N137 903 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 GPC2Q8N158 579 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 WBP1LQ9NX94 342 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 MIS18AQ9NYP9 233 aa27.39■■□□□ 1.98
PKP3-205ENST00000527442 RASSF10A6NK89 507 aa27.38■■□□□ 1.97
PKP3-205ENST00000527442 HTATSF1O43719 755 aaKnown RBP27.38■■□□□ 1.97
PKP3-205ENST00000527442 PSMD1Q99460 953 aa27.38■■□□□ 1.97
PKP3-205ENST00000527442 THSD7BQ9C0I4 1608 aa27.38■■□□□ 1.97
PKP3-205ENST00000527442 TAF7Q15545 349 aaPredicted RBP27.37■■□□□ 1.97
PKP3-205ENST00000527442 LBX1P52954 281 aa27.36■■□□□ 1.97
PKP3-205ENST00000527442 SLC51AQ86UW1 340 aa27.36■■□□□ 1.97
PKP3-205ENST00000527442 NGEFQ8N5V2 710 aa27.36■■□□□ 1.97
PKP3-205ENST00000527442 MAPK8IP3Q9UPT6 1336 aa27.36■■□□□ 1.97
PKP3-205ENST00000527442 RIC1Q4ADV7 1423 aa27.35■■□□□ 1.97
PKP3-205ENST00000527442 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
PKP3-205ENST00000527442 DEFB115Q30KQ5 88 aa27.35■■□□□ 1.97
PKP3-205ENST00000527442 JDP2Q8WYK2 163 aa27.35■■□□□ 1.97
PKP3-205ENST00000527442 NYXQ9GZU5 481 aa27.35■■□□□ 1.97
PKP3-205ENST00000527442 TRPM7Q96QT4 1865 aa27.34■■□□□ 1.97
PKP3-205ENST00000527442 YTHDC1Q96MU7 727 aaKnown RBP27.34■■□□□ 1.97
PKP3-205ENST00000527442 GJA3Q9Y6H8 435 aa27.34■■□□□ 1.97
PKP3-205ENST00000527442 MAP3K15Q6ZN16 1313 aa27.33■■□□□ 1.97
PKP3-205ENST00000527442 UBN2Q6ZU65 1347 aa27.33■■□□□ 1.97
PKP3-205ENST00000527442 ERVV-1B6SEH8 477 aa27.32■■□□□ 1.96
PKP3-205ENST00000527442 NEFMP07197 916 aa27.32■■□□□ 1.96
PKP3-205ENST00000527442 HSPA8P11142 646 aaKnown RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 EIF6P56537 245 aaKnown RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 NCBP3Q53F19 620 aaKnown RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 CC2D2BQ6DHV5 1058 aa27.32■■□□□ 1.96
PKP3-205ENST00000527442 TTLL7Q6ZT98 887 aa27.32■■□□□ 1.96
PKP3-205ENST00000527442 ABT1Q9ULW3 272 aaKnown RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 WDR33Q9C0J8 1336 aaKnown RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 IBTKQ9P2D0 1353 aaPredicted RBP27.32■■□□□ 1.96
PKP3-205ENST00000527442 APAF1O14727 1248 aa27.31■■□□□ 1.96
PKP3-205ENST00000527442 GPTP24298 496 aa27.31■■□□□ 1.96
PKP3-205ENST00000527442 HOXA10P31260 410 aaPredicted RBP27.31■■□□□ 1.96
PKP3-205ENST00000527442 RPGRQ92834 1020 aaKnown RBP27.31■■□□□ 1.96
PKP3-205ENST00000527442 SCNN1DP51172 638 aa27.3■■□□□ 1.96
PKP3-205ENST00000527442 FMR1Q06787 632 aaKnown RBP eCLIP27.3■■□□□ 1.963e-7■□□□□ 10.6
PKP3-205ENST00000527442 DDX21Q9NR30 783 aaKnown RBP eCLIP27.3■■□□□ 1.96
PKP3-205ENST00000527442 RRP7AQ9Y3A4 280 aaKnown RBP27.3■■□□□ 1.96
PKP3-205ENST00000527442 ZBED9Q6R2W3 1325 aa27.3■■□□□ 1.96
PKP3-205ENST00000527442 LMOD1P29536 600 aaPredicted RBP27.29■■□□□ 1.96
PKP3-205ENST00000527442 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
PKP3-205ENST00000527442 ZBTB3Q9H5J0 574 aa27.29■■□□□ 1.96
PKP3-205ENST00000527442 EPS15P42566 896 aa27.28■■□□□ 1.96
PKP3-205ENST00000527442 LARGE2Q8N3Y3 721 aa27.28■■□□□ 1.96
PKP3-205ENST00000527442 MYL6BP14649 208 aa27.27■■□□□ 1.96
PKP3-205ENST00000527442 EIF4A1P60842 406 aaKnown RBP27.27■■□□□ 1.96
PKP3-205ENST00000527442 SUSD4Q5VX71 490 aa27.27■■□□□ 1.96
PKP3-205ENST00000527442 C3orf67Q6ZVT6 689 aa27.27■■□□□ 1.96
PKP3-205ENST00000527442 TCERG1O14776 1098 aaKnown RBP27.26■■□□□ 1.95
PKP3-205ENST00000527442 PPEF1O14829 653 aaPredicted RBP27.26■■□□□ 1.95
PKP3-205ENST00000527442 MAP2K1Q02750 393 aaPredicted RBP27.26■■□□□ 1.95
PKP3-205ENST00000527442 LAMB2P55268 1798 aa27.26■■□□□ 1.95
PKP3-205ENST00000527442 NTSR2O95665 410 aa27.25■■□□□ 1.95
PKP3-205ENST00000527442 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
PKP3-205ENST00000527442 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
PKP3-205ENST00000527442 CRAMP1Q96RY5 1269 aa27.25■■□□□ 1.95
PKP3-205ENST00000527442 ZNF34Q8IZ26 560 aa27.24■■□□□ 1.95
PKP3-205ENST00000527442 RBM17Q96I25 401 aaKnown RBP27.24■■□□□ 1.95
PKP3-205ENST00000527442 THUMPD2Q9BTF0 503 aaKnown RBP27.24■■□□□ 1.95
PKP3-205ENST00000527442 ANKRD36CQ5JPF3 1778 aa27.24■■□□□ 1.95
PKP3-205ENST00000527442 CCDC27Q2M243 656 aa27.23■■□□□ 1.95
PKP3-205ENST00000527442 GRIPAP1Q4V328 841 aa27.23■■□□□ 1.95
PKP3-205ENST00000527442 ABHD8Q96I13 439 aa27.23■■□□□ 1.95
PKP3-205ENST00000527442 CAPNS2Q96L46 248 aa27.23■■□□□ 1.95
PKP3-205ENST00000527442 TRAF5O00463 557 aa27.22■■□□□ 1.95
PKP3-205ENST00000527442 PAXIP1Q6ZW49 1069 aaPredicted RBP27.22■■□□□ 1.95
PKP3-205ENST00000527442 NIM1KQ8IY84 436 aa27.22■■□□□ 1.95
PKP3-205ENST00000527442 ZNF521Q96K83 1311 aa27.21■■□□□ 1.95
PKP3-205ENST00000527442 GIGYF2Q6Y7W6 1299 aaKnown RBP27.21■■□□□ 1.95
PKP3-205ENST00000527442 USP50Q70EL3 339 aaPredicted RBP27.21■■□□□ 1.95
PKP3-205ENST00000527442 PPIP5K2O43314 1243 aa27.2■■□□□ 1.94
PKP3-205ENST00000527442 GRM1Q13255 1194 aa27.2■■□□□ 1.94
PKP3-205ENST00000527442 CST9Q5W186 159 aa27.2■■□□□ 1.94
PKP3-205ENST00000527442 CYP4F22Q6NT55 531 aa27.2■■□□□ 1.94
PKP3-205ENST00000527442 AOC3Q16853 763 aa27.19■■□□□ 1.94
PKP3-205ENST00000527442 ECE1P42892 770 aa27.18■■□□□ 1.94
PKP3-205ENST00000527442 ERBB4Q15303 1308 aa27.17■■□□□ 1.94
PKP3-205ENST00000527442 PPP1R42Q7Z4L9 355 aa27.17■■□□□ 1.94
PKP3-205ENST00000527442 GPRC5DQ9NZD1 345 aa27.17■■□□□ 1.94
PKP3-205ENST00000527442 RIPK4P57078 832 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 LMOD3Q0VAK6 560 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 LRP10Q7Z4F1 713 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 GPR101Q96P66 508 aaPredicted RBP27.16■■□□□ 1.94
PKP3-205ENST00000527442 ATP6V0A2Q9Y487 856 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 TLL2Q9Y6L7 1015 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 ABCC4O15439 1325 aa27.16■■□□□ 1.94
PKP3-205ENST00000527442 TAF1P21675 1872 aa27.15■■□□□ 1.94
PKP3-205ENST00000527442 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
PKP3-205ENST00000527442 PARP10Q53GL7 1025 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms