RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
CAPN1-207ENST00000527189 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
CAPN1-207ENST00000527189 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 APAF1O14727 1248 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 NTSR2O95665 410 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
CAPN1-207ENST00000527189 ZNF853P0CG23 659 aa17.43■□□□□ 0.38
CAPN1-207ENST00000527189 HSPA1AP0DMV8 641 aaKnown RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 HSPA1BP0DMV9 641 aaKnown RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
CAPN1-207ENST00000527189 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 UTP14AQ9BVJ6 771 aaKnown RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
CAPN1-207ENST00000527189 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
CAPN1-207ENST00000527189 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 ANXA1P04083 346 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 GNAI1P63096 354 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
CAPN1-207ENST00000527189 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
CAPN1-207ENST00000527189 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
CAPN1-207ENST00000527189 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
CAPN1-207ENST00000527189 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
CAPN1-207ENST00000527189 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
CAPN1-207ENST00000527189 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
CAPN1-207ENST00000527189 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
CAPN1-207ENST00000527189 PSMD1Q99460 953 aa17.4■□□□□ 0.38
CAPN1-207ENST00000527189 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
CAPN1-207ENST00000527189 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
CAPN1-207ENST00000527189 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
CAPN1-207ENST00000527189 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-207ENST00000527189 POTECB2RU33 542 aa17.39■□□□□ 0.37
CAPN1-207ENST00000527189 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
CAPN1-207ENST00000527189 NLRP10Q86W26 655 aa17.39■□□□□ 0.37
CAPN1-207ENST00000527189 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
CAPN1-207ENST00000527189 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
CAPN1-207ENST00000527189 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
CAPN1-207ENST00000527189 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPN1-207ENST00000527189 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
CAPN1-207ENST00000527189 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-207ENST00000527189 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-207ENST00000527189 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
CAPN1-207ENST00000527189 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-207ENST00000527189 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
CAPN1-207ENST00000527189 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-207ENST00000527189 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
CAPN1-207ENST00000527189 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
CAPN1-207ENST00000527189 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
CAPN1-207ENST00000527189 ANP32CO43423 234 aa17.35■□□□□ 0.37
CAPN1-207ENST00000527189 BBOX1O75936 387 aa17.35■□□□□ 0.37
CAPN1-207ENST00000527189 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
CAPN1-207ENST00000527189 VPS33BQ9H267 617 aa17.35■□□□□ 0.37
CAPN1-207ENST00000527189 FZD9O00144 591 aa17.34■□□□□ 0.37
CAPN1-207ENST00000527189 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-207ENST00000527189 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
CAPN1-207ENST00000527189 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
CAPN1-207ENST00000527189 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
CAPN1-207ENST00000527189 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
CAPN1-207ENST00000527189 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
CAPN1-207ENST00000527189 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.36
CAPN1-207ENST00000527189 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
CAPN1-207ENST00000527189 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
CAPN1-207ENST00000527189 ABCC4O15439 1325 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-207ENST00000527189 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-207ENST00000527189 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 DDX46Q7L014 1031 aaKnown RBP17.31■□□□□ 0.36
CAPN1-207ENST00000527189 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 GPC2Q8N158 579 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
CAPN1-207ENST00000527189 IL16Q14005 1332 aa17.3■□□□□ 0.36
CAPN1-207ENST00000527189 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
CAPN1-207ENST00000527189 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
CAPN1-207ENST00000527189 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
CAPN1-207ENST00000527189 SUPT20HQ8NEM7 779 aa17.3■□□□□ 0.36
CAPN1-207ENST00000527189 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-207ENST00000527189 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
CAPN1-207ENST00000527189 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CAPN1-207ENST00000527189 GRAPQ13588 217 aa17.29■□□□□ 0.36
CAPN1-207ENST00000527189 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
CAPN1-207ENST00000527189 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
CAPN1-207ENST00000527189 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-207ENST00000527189 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-207ENST00000527189 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
CAPN1-207ENST00000527189 SCN4AP35499 1836 aa17.28■□□□□ 0.36
CAPN1-207ENST00000527189 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
CAPN1-207ENST00000527189 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
CAPN1-207ENST00000527189 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
CAPN1-207ENST00000527189 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
CAPN1-207ENST00000527189 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
CAPN1-207ENST00000527189 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms