RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SAPCD2Q86UD0 394 aa21.93■■□□□ 1.1
CHMP4A-203ENST00000527154 MCOLN1Q9GZU1 580 aa21.93■■□□□ 1.1
CHMP4A-203ENST00000527154 ABCC12Q96J65 1359 aa21.92■■□□□ 1.1
CHMP4A-203ENST00000527154 EIF6P56537 245 aaKnown RBP21.92■■□□□ 1.1
CHMP4A-203ENST00000527154 KIF7Q2M1P5 1343 aa21.91■■□□□ 1.1
CHMP4A-203ENST00000527154 TRAF5O00463 557 aa21.91■■□□□ 1.1
CHMP4A-203ENST00000527154 SNRPA1P09661 255 aaKnown RBP21.91■■□□□ 1.1
CHMP4A-203ENST00000527154 LMOD1P29536 600 aaPredicted RBP21.91■■□□□ 1.1
CHMP4A-203ENST00000527154 BRPF1P55201 1214 aaPredicted RBP21.9■■□□□ 1.1
CHMP4A-203ENST00000527154 PGAP2Q9UHJ9 254 aa21.9■■□□□ 1.1
CHMP4A-203ENST00000527154 IBTKQ9P2D0 1353 aaPredicted RBP21.89■■□□□ 1.1
CHMP4A-203ENST00000527154 NPC1L1Q9UHC9 1359 aa21.89■■□□□ 1.1
CHMP4A-203ENST00000527154 AOC2O75106 756 aa21.89■■□□□ 1.09
CHMP4A-203ENST00000527154 HLFQ16534 295 aa21.89■■□□□ 1.09
CHMP4A-203ENST00000527154 GJA3Q9Y6H8 435 aa21.89■■□□□ 1.09
CHMP4A-203ENST00000527154 PDE4DIPQ5VU43 2346 aa21.88■■□□□ 1.09
CHMP4A-203ENST00000527154 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
CHMP4A-203ENST00000527154 TSKSQ9UJT2 592 aa21.88■■□□□ 1.09
CHMP4A-203ENST00000527154 ADARB2Q9NS39 739 aaKnown RBP21.87■■□□□ 1.09
CHMP4A-203ENST00000527154 GPRC5DQ9NZD1 345 aa21.87■■□□□ 1.09
CHMP4A-203ENST00000527154 VPS33BQ9H267 617 aa21.86■■□□□ 1.09
CHMP4A-203ENST00000527154 ERVV-1B6SEH8 477 aa21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 PAXIP1Q6ZW49 1069 aaPredicted RBP21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 LARGE2Q8N3Y3 721 aa21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 NYXQ9GZU5 481 aa21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
CHMP4A-203ENST00000527154 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
CHMP4A-203ENST00000527154 CASP8AP2Q9UKL3 1982 aa21.83■■□□□ 1.09
CHMP4A-203ENST00000527154 SLC51AQ86UW1 340 aa21.83■■□□□ 1.09
CHMP4A-203ENST00000527154 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
CHMP4A-203ENST00000527154 CELF2O95319 508 aaKnown RBP21.82■■□□□ 1.08
CHMP4A-203ENST00000527154 GRM1Q13255 1194 aa21.82■■□□□ 1.08
CHMP4A-203ENST00000527154 NUTM1Q86Y26 1132 aa21.82■■□□□ 1.08
CHMP4A-203ENST00000527154 ZC3H15Q8WU90 426 aaKnown RBP21.82■■□□□ 1.08
CHMP4A-203ENST00000527154 FAM177BA6PVY3 158 aa21.81■■□□□ 1.08
CHMP4A-203ENST00000527154 RTFDC1Q9BY42 306 aaPredicted RBP21.81■■□□□ 1.08
CHMP4A-203ENST00000527154 UBN2Q6ZU65 1347 aa21.8■■□□□ 1.08
CHMP4A-203ENST00000527154 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
CHMP4A-203ENST00000527154 CXCL9Q07325 125 aa21.8■■□□□ 1.08
CHMP4A-203ENST00000527154 NIM1KQ8IY84 436 aa21.8■■□□□ 1.08
CHMP4A-203ENST00000527154 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 GTF2E1P29083 439 aaPredicted RBP21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 DGKZQ13574 1117 aa21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 GLIS2Q9BZE0 524 aaPredicted RBP21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 MAP3K15Q6ZN16 1313 aa21.79■■□□□ 1.08
CHMP4A-203ENST00000527154 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 HTATSF1O43719 755 aaKnown RBP21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 HIRAP54198 1017 aaPredicted RBP21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 NOGQ13253 232 aa21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 CIAPIN1Q6FI81 312 aa21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 RPGRQ92834 1020 aaKnown RBP21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 ZNRF3Q9ULT6 936 aa21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 NUP98P52948 1817 aa21.78■■□□□ 1.08
CHMP4A-203ENST00000527154 PPIP5K2O43314 1243 aa21.77■■□□□ 1.08
CHMP4A-203ENST00000527154 MCM10Q7L590 875 aa21.77■■□□□ 1.08
CHMP4A-203ENST00000527154 ZIC5Q96T25 663 aa21.77■■□□□ 1.08
CHMP4A-203ENST00000527154 NTSR2O95665 410 aa21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 AOC3Q16853 763 aa21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 C3orf67Q6ZVT6 689 aa21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 ZNF34Q8IZ26 560 aa21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 RBM17Q96I25 401 aaKnown RBP21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 ATP6V0A2Q9Y487 856 aa21.76■■□□□ 1.07
CHMP4A-203ENST00000527154 GMPSP49915 693 aaPredicted RBP21.75■■□□□ 1.07
CHMP4A-203ENST00000527154 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
CHMP4A-203ENST00000527154 SUSD4Q5VX71 490 aa21.75■■□□□ 1.07
CHMP4A-203ENST00000527154 CDC37L1Q7L3B6 337 aa21.75■■□□□ 1.07
CHMP4A-203ENST00000527154 SAGE1Q9NXZ1 904 aa21.75■■□□□ 1.07
CHMP4A-203ENST00000527154 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
CHMP4A-203ENST00000527154 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
CHMP4A-203ENST00000527154 SLC10A5Q5PT55 438 aa21.73■■□□□ 1.07
CHMP4A-203ENST00000527154 TTLL7Q6ZT98 887 aa21.73■■□□□ 1.07
CHMP4A-203ENST00000527154 KIAA2012Q0VF49 1180 aa21.72■■□□□ 1.07
CHMP4A-203ENST00000527154 TRPM4Q8TD43 1214 aa21.72■■□□□ 1.07
CHMP4A-203ENST00000527154 RTF1Q92541 710 aaKnown RBP21.72■■□□□ 1.07
CHMP4A-203ENST00000527154 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
CHMP4A-203ENST00000527154 DCTN1Q14203 1278 aa21.71■■□□□ 1.07
CHMP4A-203ENST00000527154 SUPT20HQ8NEM7 779 aa21.71■■□□□ 1.07
CHMP4A-203ENST00000527154 PRPF38BQ5VTL8 546 aaKnown RBP21.7■■□□□ 1.06
CHMP4A-203ENST00000527154 GIGYF2Q6Y7W6 1299 aaKnown RBP21.7■■□□□ 1.06
CHMP4A-203ENST00000527154 ABCC4O15439 1325 aa21.7■■□□□ 1.06
CHMP4A-203ENST00000527154 LRP10Q7Z4F1 713 aa21.69■■□□□ 1.06
CHMP4A-203ENST00000527154 KDM3BQ7LBC6 1761 aa21.69■■□□□ 1.06
CHMP4A-203ENST00000527154 GPTP24298 496 aa21.68■■□□□ 1.06
CHMP4A-203ENST00000527154 HUNKP57058 714 aa21.68■■□□□ 1.06
CHMP4A-203ENST00000527154 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
CHMP4A-203ENST00000527154 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
CHMP4A-203ENST00000527154 DUOX1Q9NRD9 1551 aa21.67■■□□□ 1.06
CHMP4A-203ENST00000527154 YDJCA8MPS7 323 aa21.67■■□□□ 1.06
CHMP4A-203ENST00000527154 TNIP1Q15025 636 aa21.67■■□□□ 1.06
CHMP4A-203ENST00000527154 PARP10Q53GL7 1025 aa21.67■■□□□ 1.06
CHMP4A-203ENST00000527154 KIF6Q6ZMV9 814 aa21.67■■□□□ 1.06
CHMP4A-203ENST00000527154 ERBB4Q15303 1308 aa21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 BBOX1O75936 387 aa21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 RGMBQ6NW40 437 aa21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 DPF2Q92785 391 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms