RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 TTLL6Q8N841 843 aa20.71■□□□□ 0.91
CHD7-204ENST00000526846 ISCA1Q9BUE6 129 aa20.71■□□□□ 0.91
CHD7-204ENST00000526846 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
CHD7-204ENST00000526846 DICER1Q9UPY3 1922 aaKnown RBP20.7■□□□□ 0.91
CHD7-204ENST00000526846 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.9
CHD7-204ENST00000526846 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
CHD7-204ENST00000526846 CRY2Q49AN0 593 aa20.69■□□□□ 0.9
CHD7-204ENST00000526846 G2E3Q7L622 706 aa20.69■□□□□ 0.9
CHD7-204ENST00000526846 MASTLQ96GX5 879 aa20.69■□□□□ 0.9
CHD7-204ENST00000526846 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
CHD7-204ENST00000526846 TAF1P21675 1872 aa20.69■□□□□ 0.9
CHD7-204ENST00000526846 TRIM28Q13263 835 aaKnown RBP20.68■□□□□ 0.9
CHD7-204ENST00000526846 ZNF622Q969S3 477 aaKnown RBP eCLIP20.68■□□□□ 0.96e-8■□□□□ 9.1
CHD7-204ENST00000526846 UTP14AQ9BVJ6 771 aaKnown RBP20.68■□□□□ 0.9
CHD7-204ENST00000526846 NPR1P16066 1061 aa20.67■□□□□ 0.9
CHD7-204ENST00000526846 SLFN5Q08AF3 891 aa20.67■□□□□ 0.9
CHD7-204ENST00000526846 SLC10A5Q5PT55 438 aa20.67■□□□□ 0.9
CHD7-204ENST00000526846 C3orf67Q6ZVT6 689 aa20.67■□□□□ 0.9
CHD7-204ENST00000526846 STK31Q9BXU1 1019 aa20.67■□□□□ 0.9
CHD7-204ENST00000526846 E9PSI1 815 aa20.66■□□□□ 0.9
CHD7-204ENST00000526846 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
CHD7-204ENST00000526846 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
CHD7-204ENST00000526846 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
CHD7-204ENST00000526846 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
CHD7-204ENST00000526846 TIAM2Q8IVF5 1701 aa20.66■□□□□ 0.9
CHD7-204ENST00000526846 MYH3P11055 1940 aa20.65■□□□□ 0.9
CHD7-204ENST00000526846 ATP5J2-PTCD1G3V325 749 aa20.65■□□□□ 0.9
CHD7-204ENST00000526846 SLC4A2P04920 1241 aa20.65■□□□□ 0.9
CHD7-204ENST00000526846 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
CHD7-204ENST00000526846 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
CHD7-204ENST00000526846 TRMT2AQ8IZ69 625 aaKnown RBP20.65■□□□□ 0.9
CHD7-204ENST00000526846 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
CHD7-204ENST00000526846 ZNF784Q8NCA9 323 aaPredicted RBP20.64■□□□□ 0.89
CHD7-204ENST00000526846 C7orf43Q8WVR3 580 aa20.64■□□□□ 0.89
CHD7-204ENST00000526846 CDCA7LQ96GN5 454 aa20.64■□□□□ 0.89
CHD7-204ENST00000526846 METTL22Q9BUU2 404 aaPredicted RBP20.64■□□□□ 0.89
CHD7-204ENST00000526846 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
CHD7-204ENST00000526846 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
CHD7-204ENST00000526846 HOXA10P31260 410 aaPredicted RBP20.63■□□□□ 0.89
CHD7-204ENST00000526846 PRELPP51888 382 aa20.63■□□□□ 0.89
CHD7-204ENST00000526846 KSR2Q6VAB6 950 aa20.63■□□□□ 0.89
CHD7-204ENST00000526846 TRMT112Q9UI30 125 aaKnown RBP20.63■□□□□ 0.89
CHD7-204ENST00000526846 PI4KAP2A4QPH2 592 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 NFKBIEO00221 500 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 FLIIQ13045 1269 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 PI4KAP1Q8N8J0 262 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 ZNF428Q96B54 188 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 MYD88Q99836 296 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 MAP3K2Q9Y2U5 619 aa20.62■□□□□ 0.89
CHD7-204ENST00000526846 COL4A1P02462 1669 aa20.61■□□□□ 0.89
CHD7-204ENST00000526846 C21orf2O43822 256 aa20.61■□□□□ 0.89
CHD7-204ENST00000526846 RASSF7Q02833 373 aa20.61■□□□□ 0.89
CHD7-204ENST00000526846 LRRC37AA6NMS7 1700 aa20.61■□□□□ 0.89
CHD7-204ENST00000526846 IGKV5-2P06315 115 aa20.6■□□□□ 0.89
CHD7-204ENST00000526846 HCLS1P14317 486 aaPredicted RBP20.6■□□□□ 0.89
CHD7-204ENST00000526846 CCDC191Q8NCU4 936 aa20.59■□□□□ 0.89
CHD7-204ENST00000526846 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
CHD7-204ENST00000526846 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
CHD7-204ENST00000526846 LTBP3Q9NS15 1303 aa20.58■□□□□ 0.89
CHD7-204ENST00000526846 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
CHD7-204ENST00000526846 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
CHD7-204ENST00000526846 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
CHD7-204ENST00000526846 C9orf131Q5VYM1 1079 aa20.57■□□□□ 0.88
CHD7-204ENST00000526846 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
CHD7-204ENST00000526846 ZBTB38Q8NAP3 1195 aaPredicted RBP20.57■□□□□ 0.88
CHD7-204ENST00000526846 RPGRQ92834 1020 aaKnown RBP20.57■□□□□ 0.88
CHD7-204ENST00000526846 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
CHD7-204ENST00000526846 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
CHD7-204ENST00000526846 SLC51AQ86UW1 340 aa20.56■□□□□ 0.88
CHD7-204ENST00000526846 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
CHD7-204ENST00000526846 ABCC4O15439 1325 aa20.55■□□□□ 0.88
CHD7-204ENST00000526846 NEURL1BA8MQ27 555 aa20.55■□□□□ 0.88
CHD7-204ENST00000526846 CWF19L2Q2TBE0 894 aaKnown RBP20.55■□□□□ 0.88
CHD7-204ENST00000526846 SOGA3Q5TF21 947 aa20.55■□□□□ 0.88
CHD7-204ENST00000526846 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
CHD7-204ENST00000526846 RBM17Q96I25 401 aaKnown RBP20.55■□□□□ 0.88
CHD7-204ENST00000526846 LTBP1Q14766 1721 aa20.54■□□□□ 0.88
CHD7-204ENST00000526846 IRS4O14654 1257 aaPredicted RBP20.54■□□□□ 0.88
CHD7-204ENST00000526846 LMNB1P20700 586 aa20.54■□□□□ 0.88
CHD7-204ENST00000526846 SF3B3Q15393 1217 aaKnown RBP20.54■□□□□ 0.88
CHD7-204ENST00000526846 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
CHD7-204ENST00000526846 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
CHD7-204ENST00000526846 RNF181Q9P0P0 153 aa20.54■□□□□ 0.88
CHD7-204ENST00000526846 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
CHD7-204ENST00000526846 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
CHD7-204ENST00000526846 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
CHD7-204ENST00000526846 F6X3S4 739 aa20.52■□□□□ 0.88
CHD7-204ENST00000526846 NEXNQ0ZGT2 675 aa20.52■□□□□ 0.88
CHD7-204ENST00000526846 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
CHD7-204ENST00000526846 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
CHD7-204ENST00000526846 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.88
CHD7-204ENST00000526846 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
CHD7-204ENST00000526846 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
CHD7-204ENST00000526846 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
CHD7-204ENST00000526846 H7C1W4 665 aa20.5■□□□□ 0.87
CHD7-204ENST00000526846 PPEF1O14829 653 aaPredicted RBP20.5■□□□□ 0.87
CHD7-204ENST00000526846 CASP7P55210 303 aa20.5■□□□□ 0.87
CHD7-204ENST00000526846 HNRNPUQ00839 825 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHD7-204ENST00000526846 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
CHD7-204ENST00000526846 COL4A5P29400 1685 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms