RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 SOS2Q07890 1332 aaPredicted RBP11.79□□□□□ -0.52
USP35-201ENST00000526425 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
USP35-201ENST00000526425 PHKG2P15735 406 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 CAVIN1Q6NZI2 390 aaKnown RBP11.78□□□□□ -0.52
USP35-201ENST00000526425 LARP1Q6PKG0 1096 aaKnown RBP11.78□□□□□ -0.52
USP35-201ENST00000526425 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
USP35-201ENST00000526425 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
USP35-201ENST00000526425 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 CPA1P15085 419 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 TIGD1Q96MW7 591 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
USP35-201ENST00000526425 A0A087WZG4 1122 aa11.77□□□□□ -0.52
USP35-201ENST00000526425 ZNF790Q6PG37 636 aa11.77□□□□□ -0.52
USP35-201ENST00000526425 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.52
USP35-201ENST00000526425 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.52
USP35-201ENST00000526425 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
USP35-201ENST00000526425 TCEANC2Q96MN5 208 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
USP35-201ENST00000526425 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 KSR2Q6VAB6 950 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 ESYT1Q9BSJ8 1104 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 HYPKQ9NX55 129 aa11.77□□□□□ -0.53
USP35-201ENST00000526425 CCDC66A2RUB6 948 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
USP35-201ENST00000526425 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
USP35-201ENST00000526425 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 PCDH11XQ9BZA7 1347 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 PCDH11YQ9BZA8 1340 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 HOXB7P09629 217 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 PRPF40BQ6NWY9 871 aaKnown RBP11.76□□□□□ -0.53
USP35-201ENST00000526425 RUFY2Q8WXA3 655 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
USP35-201ENST00000526425 GRM8O00222 908 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 STK3Q13188 491 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
USP35-201ENST00000526425 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
USP35-201ENST00000526425 NUCB2P80303 420 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 EXOC5O00471 708 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 CHMLP26374 656 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 PKP1Q13835 747 aa11.75□□□□□ -0.53
USP35-201ENST00000526425 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
USP35-201ENST00000526425 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
USP35-201ENST00000526425 ZKSCAN1P17029 563 aaPredicted RBP11.74□□□□□ -0.53
USP35-201ENST00000526425 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
USP35-201ENST00000526425 SUCLG2Q96I99 432 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 CARD10Q9BWT7 1032 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 NFAT5O94916 1531 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 CYP27B1O15528 508 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 GPTP24298 496 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 GTF2A1P52655 376 aaPredicted RBP11.74□□□□□ -0.53
USP35-201ENST00000526425 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
USP35-201ENST00000526425 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
USP35-201ENST00000526425 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
USP35-201ENST00000526425 A1BGP04217 495 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 BEND3Q5T5X7 828 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 NPHP1O15259 732 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 KDM4AO75164 1064 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
USP35-201ENST00000526425 MEX3CQ5U5Q3 659 aaKnown RBP11.72□□□□□ -0.53
USP35-201ENST00000526425 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 SNX21Q969T3 373 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
USP35-201ENST00000526425 CPDO75976 1380 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 ERC1Q8IUD2 1116 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 SNRKQ9NRH2 765 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
USP35-201ENST00000526425 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
USP35-201ENST00000526425 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.53
USP35-201ENST00000526425 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 FIBPO43427 364 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
USP35-201ENST00000526425 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP35-201ENST00000526425 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
USP35-201ENST00000526425 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
USP35-201ENST00000526425 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
USP35-201ENST00000526425 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 SSH3Q8TE77 659 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 RSPH14Q9UHP6 348 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms