RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 IMMTQ16891 758 aaKnown RBP7.97□□□□□ -1.13
LIN7C-202ENST00000524596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.97□□□□□ -1.13
LIN7C-202ENST00000524596 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 KIAA0825Q8IV33 1275 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 STK3Q13188 491 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 MLECQ14165 292 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 CTCFLQ8NI51 663 aaPredicted RBP7.97□□□□□ -1.13
LIN7C-202ENST00000524596 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 MRS2Q9HD23 443 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 KRT82Q9NSB4 513 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 ZNF652Q9Y2D9 606 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 SYNRGQ9UMZ2 1314 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 CAPN2P17655 700 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 TMF1P82094 1093 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 DYNC1I2Q13409 638 aaKnown RBP7.97□□□□□ -1.13
LIN7C-202ENST00000524596 SPECC1Q5M775 1068 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
LIN7C-202ENST00000524596 CGNL1Q0VF96 1302 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 NEMFO60524 1076 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 ARPC4P59998 168 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 AKAP17AQ02040 695 aaKnown RBP7.96□□□□□ -1.13
LIN7C-202ENST00000524596 NDUFAF2Q8N183 169 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 FNBP4Q8N3X1 1017 aaPredicted RBP7.96□□□□□ -1.13
LIN7C-202ENST00000524596 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.96□□□□□ -1.13
LIN7C-202ENST00000524596 GSDMBQ8TAX9 411 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 NSRP1Q9H0G5 558 aaKnown RBP7.96□□□□□ -1.13
LIN7C-202ENST00000524596 SFMBT1Q9UHJ3 866 aa7.96□□□□□ -1.13
LIN7C-202ENST00000524596 ELF1P32519 619 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 KIF5BP33176 963 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 CRYMQ14894 314 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 CCDC158Q5M9N0 1113 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 TSPYL2Q9H2G4 693 aaPredicted RBP7.96□□□□□ -1.14
LIN7C-202ENST00000524596 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 LUC7L2Q9Y383 392 aaKnown RBP7.96□□□□□ -1.14
LIN7C-202ENST00000524596 TUBA1BP68363 451 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 KBTBD12Q3ZCT8 623 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 CCDC40Q4G0X9 1142 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 TUBA1AQ71U36 451 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 RPS6KC1Q96S38 1066 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 TRMT1Q9NXH9 659 aaKnown RBP7.96□□□□□ -1.14
LIN7C-202ENST00000524596 EVLQ9UI08 416 aaPredicted RBP7.96□□□□□ -1.14
LIN7C-202ENST00000524596 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
LIN7C-202ENST00000524596 EXOC5O00471 708 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 IMPDH2P12268 514 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 GCFC2P16383 781 aaKnown RBP7.95□□□□□ -1.14
LIN7C-202ENST00000524596 TUBA3CQ13748 450 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 SF3B3Q15393 1217 aaKnown RBP7.95□□□□□ -1.14
LIN7C-202ENST00000524596 PPP1R21Q6ZMI0 780 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 NEUROD6Q96NK8 337 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 OSBPL9Q96SU4 736 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 SMTNL1A8MU46 457 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 EPS15P42566 896 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 LAMB3Q13751 1172 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 CCDC57Q2TAC2 916 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
LIN7C-202ENST00000524596 RNF187Q5TA31 235 aaPredicted RBP7.95□□□□□ -1.14
LIN7C-202ENST00000524596 TTC14Q96N46 770 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 PHLDB1Q86UU1 1377 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 SLC26A4O43511 780 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 BASP1P80723 227 aaKnown RBP7.95□□□□□ -1.14
LIN7C-202ENST00000524596 PPFIBP2Q8ND30 876 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 TRIM63Q969Q1 353 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 CARD8Q9Y2G2 431 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 UBXN4Q92575 508 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
LIN7C-202ENST00000524596 A0A087WUV0 522 aaPredicted RBP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 IFT88Q13099 833 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 GKAP1Q5VSY0 366 aaPredicted RBP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CEP112Q8N8E3 955 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CCDC26Q8TAB7 109 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 ATP6V0A1Q93050 837 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 SLC39A3Q9BRY0 314 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 TRIM64CA6NLI5 447 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 PPFIA4O75335 1185 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CD53P19397 219 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 POLR2FP61218 127 aaKnown RBP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CCDC30Q5VVM6 783 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 SYT10Q6XYQ8 523 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 TMEM110Q86TL2 294 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 LRRC43Q8N309 656 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 PIBF1Q8WXW3 757 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 DHX36Q9H2U1 1008 aaKnown RBP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 MACROD2A1Z1Q3 448 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 EBAG9O00559 213 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 DIAPH2O60879 1101 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 MCM3P25205 808 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 MAP3K7CLP57077 242 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 HSP90AA5PQ58FG0 334 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 MYO1HQ8N1T3 1032 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 BAG1Q99933 345 aaPredicted RBP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.94□□□□□ -1.143e-10■■■■□ 19.3
LIN7C-202ENST00000524596 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
LIN7C-202ENST00000524596 MTUS1Q9ULD2 1270 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 BICRAQ9NZM4 1560 aa7.94□□□□□ -1.14
LIN7C-202ENST00000524596 CAVIN2O95810 425 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms