RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 GPC2Q8N158 579 aa16.49■□□□□ 0.23
MCM4-216ENST00000524086 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
MCM4-216ENST00000524086 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
MCM4-216ENST00000524086 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
MCM4-216ENST00000524086 CHL1O00533 1208 aa16.48■□□□□ 0.23
MCM4-216ENST00000524086 BBOX1O75936 387 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 NTSR2O95665 410 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 HOXB7P09629 217 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 PDIA6Q15084 440 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
MCM4-216ENST00000524086 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
MCM4-216ENST00000524086 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
MCM4-216ENST00000524086 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
MCM4-216ENST00000524086 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
MCM4-216ENST00000524086 COPS6Q7L5N1 327 aa16.46■□□□□ 0.23
MCM4-216ENST00000524086 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
MCM4-216ENST00000524086 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
MCM4-216ENST00000524086 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
MCM4-216ENST00000524086 EPHX2P34913 555 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 CCDC88AQ3V6T2 1871 aa16.45■□□□□ 0.22
MCM4-216ENST00000524086 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
MCM4-216ENST00000524086 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
MCM4-216ENST00000524086 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
MCM4-216ENST00000524086 XAGE3Q8WTP9 111 aa16.43■□□□□ 0.22
MCM4-216ENST00000524086 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
MCM4-216ENST00000524086 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
MCM4-216ENST00000524086 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
MCM4-216ENST00000524086 TMEM88BA6NKF7 163 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 AIMP1Q12904 312 aaKnown RBP16.42■□□□□ 0.22
MCM4-216ENST00000524086 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
MCM4-216ENST00000524086 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
MCM4-216ENST00000524086 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
MCM4-216ENST00000524086 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
MCM4-216ENST00000524086 ITGBL1O95965 494 aaPredicted RBP16.41■□□□□ 0.22
MCM4-216ENST00000524086 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
MCM4-216ENST00000524086 HDGFL1Q5TGJ6 251 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 PLBD2Q8NHP8 589 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
MCM4-216ENST00000524086 SCN4AP35499 1836 aa16.4■□□□□ 0.22
MCM4-216ENST00000524086 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
MCM4-216ENST00000524086 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
MCM4-216ENST00000524086 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
MCM4-216ENST00000524086 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
MCM4-216ENST00000524086 ANXA1P04083 346 aa16.39■□□□□ 0.21
MCM4-216ENST00000524086 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
MCM4-216ENST00000524086 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
MCM4-216ENST00000524086 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
MCM4-216ENST00000524086 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
MCM4-216ENST00000524086 MPNDQ8N594 471 aa16.39■□□□□ 0.21
MCM4-216ENST00000524086 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
MCM4-216ENST00000524086 NUP98P52948 1817 aa16.39■□□□□ 0.21
MCM4-216ENST00000524086 SNED1Q8TER0 1413 aa16.38■□□□□ 0.21
MCM4-216ENST00000524086 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
MCM4-216ENST00000524086 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
MCM4-216ENST00000524086 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
MCM4-216ENST00000524086 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
MCM4-216ENST00000524086 ZNRF3Q9ULT6 936 aa16.38■□□□□ 0.21
MCM4-216ENST00000524086 GNAI1P63096 354 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 TRIM28Q13263 835 aaKnown RBP16.37■□□□□ 0.21
MCM4-216ENST00000524086 GRAPQ13588 217 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 TNIP1Q15025 636 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
MCM4-216ENST00000524086 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 ABCC4O15439 1325 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
MCM4-216ENST00000524086 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
MCM4-216ENST00000524086 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
MCM4-216ENST00000524086 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
MCM4-216ENST00000524086 KIAA2012Q0VF49 1180 aa16.35■□□□□ 0.21
MCM4-216ENST00000524086 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
MCM4-216ENST00000524086 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
MCM4-216ENST00000524086 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
MCM4-216ENST00000524086 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
MCM4-216ENST00000524086 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
MCM4-216ENST00000524086 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms