RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ADCY9O60503 1353 aa5.55□□□□□ -1.52
NPM1-210ENST00000523339 KNDC1Q76NI1 1749 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 PARP4Q9UKK3 1724 aaKnown RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 KDM2BQ8NHM5 1336 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 KDM4AO75164 1064 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 HMGB2P26583 209 aaKnown RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 MDM2Q00987 491 aaPredicted RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 CTC1Q2NKJ3 1217 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 RC3H1Q5TC82 1133 aaKnown RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 DDX54Q8TDD1 881 aaKnown RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 CDK19Q9BWU1 502 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 LRRC4BQ9NT99 713 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 BCS1LQ9Y276 419 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 BCL9O00512 1426 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 PPLO60437 1756 aa5.54□□□□□ -1.52
NPM1-210ENST00000523339 TRPM3Q9HCF6 1732 aaPredicted RBP5.54□□□□□ -1.52
NPM1-210ENST00000523339 LRRC37A3O60309 1634 aa5.53□□□□□ -1.52
NPM1-210ENST00000523339 PHRF1Q9P1Y6 1649 aaKnown RBP5.53□□□□□ -1.52
NPM1-210ENST00000523339 IL2RBP14784 551 aa5.53□□□□□ -1.52
NPM1-210ENST00000523339 MLLT1Q03111 559 aaPredicted RBP5.53□□□□□ -1.52
NPM1-210ENST00000523339 PPARGC1BQ86YN6 1023 aaKnown RBP5.53□□□□□ -1.52
NPM1-210ENST00000523339 KCNH5Q8NCM2 988 aa5.53□□□□□ -1.52
NPM1-210ENST00000523339 FLAD1Q8NFF5 587 aa5.53□□□□□ -1.52
NPM1-210ENST00000523339 CCDC7Q96M83 1385 aa5.53□□□□□ -1.52
NPM1-210ENST00000523339 USP19O94966 1318 aa5.52□□□□□ -1.53
NPM1-210ENST00000523339 SIAH2O43255 324 aa5.52□□□□□ -1.53
NPM1-210ENST00000523339 COL23A1Q86Y22 540 aaPredicted RBP5.52□□□□□ -1.53
NPM1-210ENST00000523339 CCDC24Q8N4L8 307 aa5.52□□□□□ -1.53
NPM1-210ENST00000523339 AK7Q96M32 723 aa5.52□□□□□ -1.53
NPM1-210ENST00000523339 PCDHGC3Q9UN70 934 aa5.52□□□□□ -1.53
NPM1-210ENST00000523339 PEAK1Q9H792 1746 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 TNS2Q63HR2 1409 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 PPIP5K1Q6PFW1 1433 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 CCDC85CA6NKD9 419 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 HOXA2O43364 376 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 MAP2K5Q13163 448 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 GRIPAP1Q4V328 841 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 RRAGCQ9HB90 399 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 USP47Q96K76 1375 aa5.51□□□□□ -1.53
NPM1-210ENST00000523339 PLEKHG3A1L390 1219 aa5.5□□□□□ -1.53
NPM1-210ENST00000523339 TERTO14746 1132 aaKnown RBP5.5□□□□□ -1.53
NPM1-210ENST00000523339 WIPF1O43516 503 aa5.5□□□□□ -1.53
NPM1-210ENST00000523339 Q3C1V9 767 aa5.5□□□□□ -1.53
NPM1-210ENST00000523339 C9orf131Q5VYM1 1079 aa5.5□□□□□ -1.53
NPM1-210ENST00000523339 RNF181Q9P0P0 153 aa5.5□□□□□ -1.53
NPM1-210ENST00000523339 POLR3AO14802 1390 aaPredicted RBP5.5□□□□□ -1.53
NPM1-210ENST00000523339 SPATA31E1Q6ZUB1 1445 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 WDR90Q96KV7 1748 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
NPM1-210ENST00000523339 CTCFP49711 727 aaPredicted RBP5.49□□□□□ -1.53
NPM1-210ENST00000523339 DCAF11Q8TEB1 546 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 TRIM47Q96LD4 638 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 MKRN1Q9UHC7 482 aaKnown RBP5.49□□□□□ -1.53
NPM1-210ENST00000523339 PLEKHG2Q9H7P9 1386 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 LMO7Q8WWI1 1683 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 AKAP12Q02952 1782 aa5.49□□□□□ -1.53
NPM1-210ENST00000523339 CPSF1Q10570 1443 aaKnown RBP5.48□□□□□ -1.53
NPM1-210ENST00000523339 CRYBG1Q9Y4K1 1723 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 TRIM46Q7Z4K8 759 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 CCDC102AQ96A19 550 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 LTV1Q96GA3 475 aaPredicted RBP5.48□□□□□ -1.53
NPM1-210ENST00000523339 MPHOSPH9Q99550 1183 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 FAM217BQ9NTX9 383 aaPredicted RBP5.48□□□□□ -1.53
NPM1-210ENST00000523339 CABP1Q9NZU7 370 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 PCNTO95613 3336 aa5.48□□□□□ -1.53
NPM1-210ENST00000523339 SBF2Q86WG5 1849 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 A0A0G2JLW4 131 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ALDH1A1P00352 501 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 JUNDP17535 347 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 NDUFV2P19404 249 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 SH3BP2P78314 561 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ARHGEF25Q86VW2 580 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ANKRD24Q8TF21 1146 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ABHD8Q96I13 439 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 BEGAINQ9BUH8 593 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 PRDM10Q9NQV6 1147 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ITSN1Q15811 1721 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 PAPPAQ13219 1627 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 NHSQ6T4R5 1651 aa5.47□□□□□ -1.53
NPM1-210ENST00000523339 ANKRD36BQ8N2N9 1353 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 FOXN1O15353 648 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
NPM1-210ENST00000523339 LBX1P52954 281 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 WNT7BP56706 349 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 TGFB2P61812 414 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 CCDC87Q9NVE4 849 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 ABCC6O95255 1503 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 KCPQ6ZWJ8 1503 aa5.46□□□□□ -1.54
NPM1-210ENST00000523339 MMP10P09238 476 aa5.45□□□□□ -1.54
NPM1-210ENST00000523339 USP46P62068 366 aa5.45□□□□□ -1.54
NPM1-210ENST00000523339 DALRD3Q5D0E6 543 aaKnown RBP5.45□□□□□ -1.54
NPM1-210ENST00000523339 MPRIPQ6WCQ1 1025 aa5.45□□□□□ -1.54
NPM1-210ENST00000523339 NSD3Q9BZ95 1437 aa5.45□□□□□ -1.54
NPM1-210ENST00000523339 ARHGEF28Q8N1W1 1705 aaKnown RBP5.45□□□□□ -1.54
NPM1-210ENST00000523339 TRPM1Q7Z4N2 1603 aa5.45□□□□□ -1.54
NPM1-210ENST00000523339 BMP1P13497 986 aa5.44□□□□□ -1.54
NPM1-210ENST00000523339 DPEP1P16444 411 aa5.44□□□□□ -1.54
NPM1-210ENST00000523339 SSTR3P32745 418 aaPredicted RBP5.44□□□□□ -1.54
NPM1-210ENST00000523339 VEGFBP49765 207 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms