RNA–Protein interactions for RNA: ENST00000523283.5

LINC00534-202, long intergenic non-protein coding RNA 534, humanhuman

TSL 2

Gene LINC00534, Length 772 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-202ENST00000523283 DDX17Q92841 729 aaKnown RBP8.16□□□□□ -1.1
LINC00534-202ENST00000523283 NBPF4Q96M43 638 aa8.16□□□□□ -1.1
LINC00534-202ENST00000523283 SLAIN2Q9P270 581 aa8.16□□□□□ -1.1
LINC00534-202ENST00000523283 TSPYL4Q9UJ04 414 aa8.16□□□□□ -1.1
LINC00534-202ENST00000523283 KDM4AO75164 1064 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 ZPR1O75312 459 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 RLBP1P12271 317 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 TSPYL6Q8N831 410 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 C8orf58Q8NAV2 365 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 CHMP4BQ9H444 224 aaKnown RBP8.15□□□□□ -1.1
LINC00534-202ENST00000523283 DDX19BQ9UMR2 479 aa8.15□□□□□ -1.1
LINC00534-202ENST00000523283 RBM19Q9Y4C8 960 aaKnown RBP8.15□□□□□ -1.1
LINC00534-202ENST00000523283 USP54Q70EL1 1684 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 NFAT5O94916 1531 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 MAP3K5Q99683 1374 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 TRIM27P14373 513 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 C1orf141Q5JVX7 400 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 BRINP3Q76B58 766 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 ARHGAP45Q92619 1136 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 LRRC59Q96AG4 307 aaKnown RBP8.14□□□□□ -1.11
LINC00534-202ENST00000523283 API5Q9BZZ5 524 aaKnown RBP8.14□□□□□ -1.11
LINC00534-202ENST00000523283 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
LINC00534-202ENST00000523283 NLRP2Q9NX02 1062 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 TNNQ9UQP3 1299 aa8.14□□□□□ -1.11
LINC00534-202ENST00000523283 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 SPATA31A3Q5VYP0 1347 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 RGPD1P0DJD0 1748 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 FUT2Q10981 343 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
LINC00534-202ENST00000523283 MORN1Q5T089 497 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
LINC00534-202ENST00000523283 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
LINC00534-202ENST00000523283 CRB1P82279 1406 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 TNS3Q68CZ2 1445 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 KDM2BQ8NHM5 1336 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 COPS2P61201 443 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 SH3D19Q5HYK7 790 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 BLOC1S3Q6QNY0 202 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 RAPGEF4Q8WZA2 1011 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 SLIT3O75094 1523 aa8.12□□□□□ -1.11
LINC00534-202ENST00000523283 TEFQ10587 303 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 IL17REQ8NFR9 667 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 ZNF516Q92618 1163 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 BEGAINQ9BUH8 593 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 CHMP4AQ9BY43 222 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
LINC00534-202ENST00000523283 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
LINC00534-202ENST00000523283 LTN1O94822 1766 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-202ENST00000523283 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 IGHDP01880 384 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 TATP17735 454 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-202ENST00000523283 MCM6Q14566 821 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
LINC00534-202ENST00000523283 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
LINC00534-202ENST00000523283 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-202ENST00000523283 PXDNQ92626 1479 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 RGS20O76081 388 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 GJA5P36382 358 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 RGS3P49796 1198 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
LINC00534-202ENST00000523283 Q3C1V9 767 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 PUS10Q3MIT2 529 aaKnown RBP8.09□□□□□ -1.11
LINC00534-202ENST00000523283 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 MPRIPQ6WCQ1 1025 aa8.09□□□□□ -1.11
LINC00534-202ENST00000523283 PTPRCP08575 1304 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
LINC00534-202ENST00000523283 A0A0G2JS52 829 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
LINC00534-202ENST00000523283 HOXA2O43364 376 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 RAD21O60216 631 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 CPDO75976 1380 aa8.08□□□□□ -1.12
LINC00534-202ENST00000523283 PHRF1Q9P1Y6 1649 aaKnown RBP8.07□□□□□ -1.12
LINC00534-202ENST00000523283 ABCC4O15439 1325 aa8.07□□□□□ -1.12
LINC00534-202ENST00000523283 MED1Q15648 1581 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-202ENST00000523283 FMNL1O95466 1100 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-202ENST00000523283 GGCXP38435 758 aa8.07□□□□□ -1.12
LINC00534-202ENST00000523283 EVA1CP58658 441 aa8.07□□□□□ -1.12
LINC00534-202ENST00000523283 HDAC1Q13547 482 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-202ENST00000523283 SKAP1Q86WV1 359 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms