RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 FKBP4Q02790 459 aaKnown RBP eCLIP33.74■■■□□ 2.99
LAPTM4B-203ENST00000521545 CALD1Q05682 793 aaKnown RBP33.74■■■□□ 2.99
LAPTM4B-203ENST00000521545 HDGFL1Q5TGJ6 251 aa33.74■■■□□ 2.99
LAPTM4B-203ENST00000521545 UTP14AQ9BVJ6 771 aaKnown RBP33.74■■■□□ 2.99
LAPTM4B-203ENST00000521545 RIC1Q4ADV7 1423 aa33.73■■■□□ 2.99
LAPTM4B-203ENST00000521545 SMC1BQ8NDV3 1235 aa33.72■■■□□ 2.99
LAPTM4B-203ENST00000521545 RBM17Q96I25 401 aaKnown RBP33.72■■■□□ 2.99
LAPTM4B-203ENST00000521545 CHPF2Q9P2E5 772 aa33.72■■■□□ 2.99
LAPTM4B-203ENST00000521545 HOXA10P31260 410 aaPredicted RBP33.71■■■□□ 2.99
LAPTM4B-203ENST00000521545 OLFM4Q6UX06 510 aa33.71■■■□□ 2.99
LAPTM4B-203ENST00000521545 NLRP3Q96P20 1036 aa33.71■■■□□ 2.99
LAPTM4B-203ENST00000521545 MBIPQ9NS73 344 aa33.7■■■□□ 2.99
LAPTM4B-203ENST00000521545 DUSP27Q5VZP5 1158 aa33.69■■■□□ 2.98
LAPTM4B-203ENST00000521545 CC2D2BQ6DHV5 1058 aa33.69■■■□□ 2.98
LAPTM4B-203ENST00000521545 ZNF277Q9NRM2 450 aaPredicted RBP33.69■■■□□ 2.98
LAPTM4B-203ENST00000521545 DBF4Q9UBU7 674 aaPredicted RBP33.69■■■□□ 2.98
LAPTM4B-203ENST00000521545 GNAI1P63096 354 aa33.68■■■□□ 2.98
LAPTM4B-203ENST00000521545 TCIRG1Q13488 830 aa33.68■■■□□ 2.98
LAPTM4B-203ENST00000521545 CRAMP1Q96RY5 1269 aa33.68■■■□□ 2.98
LAPTM4B-203ENST00000521545 IFT57Q9NWB7 429 aa33.68■■■□□ 2.98
LAPTM4B-203ENST00000521545 SLC10A5Q5PT55 438 aa33.67■■■□□ 2.98
LAPTM4B-203ENST00000521545 SYNE4Q8N205 404 aa33.67■■■□□ 2.98
LAPTM4B-203ENST00000521545 RNF123Q5XPI4 1314 aa33.67■■■□□ 2.98
LAPTM4B-203ENST00000521545 ZNF853P0CG23 659 aa33.66■■■□□ 2.98
LAPTM4B-203ENST00000521545 NLRP10Q86W26 655 aa33.66■■■□□ 2.98
LAPTM4B-203ENST00000521545 WDR90Q96KV7 1748 aa33.65■■■□□ 2.98
LAPTM4B-203ENST00000521545 POTECB2RU33 542 aa33.65■■■□□ 2.98
LAPTM4B-203ENST00000521545 DDNO94850 711 aaPredicted RBP33.65■■■□□ 2.98
LAPTM4B-203ENST00000521545 HYPKQ9NX55 129 aa33.65■■■□□ 2.98
LAPTM4B-203ENST00000521545 GRIPAP1Q4V328 841 aa33.64■■■□□ 2.98
LAPTM4B-203ENST00000521545 PLBD2Q8NHP8 589 aa33.64■■■□□ 2.98
LAPTM4B-203ENST00000521545 ANKRD13DQ6ZTN6 518 aa33.63■■■□□ 2.97
LAPTM4B-203ENST00000521545 PSMD1Q99460 953 aa33.63■■■□□ 2.97
LAPTM4B-203ENST00000521545 TRMT112Q9UI30 125 aaKnown RBP33.63■■■□□ 2.97
LAPTM4B-203ENST00000521545 ZNF316A6NFI3 1004 aaPredicted RBP33.62■■■□□ 2.97
LAPTM4B-203ENST00000521545 IARSP41252 1262 aaKnown RBP33.62■■■□□ 2.97
LAPTM4B-203ENST00000521545 C3orf67Q6ZVT6 689 aa33.62■■■□□ 2.97
LAPTM4B-203ENST00000521545 TMX4Q9H1E5 349 aaPredicted RBP33.62■■■□□ 2.97
LAPTM4B-203ENST00000521545 PPEF1O14829 653 aaPredicted RBP33.61■■■□□ 2.97
LAPTM4B-203ENST00000521545 ANKRD36CQ5JPF3 1778 aa33.6■■■□□ 2.97
LAPTM4B-203ENST00000521545 CCDC184Q52MB2 194 aa33.6■■■□□ 2.97
LAPTM4B-203ENST00000521545 TCERG1O14776 1098 aaKnown RBP33.59■■■□□ 2.97
LAPTM4B-203ENST00000521545 JDP2Q8WYK2 163 aa33.59■■■□□ 2.97
LAPTM4B-203ENST00000521545 SH3TC1Q8TE82 1336 aa33.58■■■□□ 2.97
LAPTM4B-203ENST00000521545 HCLS1P14317 486 aaPredicted RBP33.58■■■□□ 2.97
LAPTM4B-203ENST00000521545 IQCA1LA6NCM1 817 aa33.57■■■□□ 2.96
LAPTM4B-203ENST00000521545 ELL2O00472 640 aaPredicted RBP33.57■■■□□ 2.96
LAPTM4B-203ENST00000521545 ANP32CO43423 234 aa33.57■■■□□ 2.96
LAPTM4B-203ENST00000521545 DNAJC5GQ8N7S2 189 aa33.57■■■□□ 2.96
LAPTM4B-203ENST00000521545 CHMP4AQ9BY43 222 aa33.57■■■□□ 2.96
LAPTM4B-203ENST00000521545 L3MBTL3Q96JM7 780 aaPredicted RBP33.54■■■□□ 2.96
LAPTM4B-203ENST00000521545 SNED1Q8TER0 1413 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 FZD9O00144 591 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 BBOX1O75936 387 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 HTRA3P83110 453 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 DDX46Q7L014 1031 aaKnown RBP33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 ISCA1Q9BUE6 129 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 ATP6V0A2Q9Y487 856 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 ABCC4O15439 1325 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 ZNF541Q9H0D2 1346 aa33.53■■■□□ 2.96
LAPTM4B-203ENST00000521545 ATP5J2-PTCD1G3V325 749 aa33.52■■■□□ 2.96
LAPTM4B-203ENST00000521545 GOLGA2Q08379 1002 aa33.52■■■□□ 2.96
LAPTM4B-203ENST00000521545 RIC3Q7Z5B4 369 aa33.52■■■□□ 2.96
LAPTM4B-203ENST00000521545 MRS2Q9HD23 443 aa33.52■■■□□ 2.96
LAPTM4B-203ENST00000521545 LARGE2Q8N3Y3 721 aa33.51■■■□□ 2.95
LAPTM4B-203ENST00000521545 C8orf58Q8NAV2 365 aa33.51■■■□□ 2.95
LAPTM4B-203ENST00000521545 ZNF428Q96B54 188 aa33.51■■■□□ 2.95
LAPTM4B-203ENST00000521545 EIF6P56537 245 aaKnown RBP33.5■■■□□ 2.95
LAPTM4B-203ENST00000521545 CHADLQ6NUI6 762 aa33.5■■■□□ 2.95
LAPTM4B-203ENST00000521545 CCDC27Q2M243 656 aa33.49■■■□□ 2.95
LAPTM4B-203ENST00000521545 TRIM28Q13263 835 aaKnown RBP33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 CCDC30Q5VVM6 783 aa33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 FAM89AQ96GI7 184 aa33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 TAF1DQ9H5J8 278 aaPredicted RBP33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 PHAXQ9H814 394 aaKnown RBP33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 HACL1Q9UJ83 578 aa33.48■■■□□ 2.95
LAPTM4B-203ENST00000521545 SP8Q8IXZ3 490 aa33.47■■■□□ 2.95
LAPTM4B-203ENST00000521545 GPC2Q8N158 579 aa33.47■■■□□ 2.95
LAPTM4B-203ENST00000521545 KLRG1Q96E93 195 aa33.47■■■□□ 2.95
LAPTM4B-203ENST00000521545 SCN4AP35499 1836 aa33.46■■■□□ 2.95
LAPTM4B-203ENST00000521545 GRAPQ13588 217 aa33.46■■■□□ 2.95
LAPTM4B-203ENST00000521545 SLC51AQ86UW1 340 aa33.46■■■□□ 2.95
LAPTM4B-203ENST00000521545 SUPT20HQ8NEM7 779 aa33.46■■■□□ 2.95
LAPTM4B-203ENST00000521545 GRAPLQ8TC17 118 aaPredicted RBP33.46■■■□□ 2.95
LAPTM4B-203ENST00000521545 WWC1Q8IX03 1113 aa33.45■■■□□ 2.95
LAPTM4B-203ENST00000521545 VPS33BQ9H267 617 aa33.45■■■□□ 2.95
LAPTM4B-203ENST00000521545 LAMB2P55268 1798 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 PPIP5K2O43314 1243 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 POTEIP0CG38 1075 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 POTEJP0CG39 1038 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 LDHDQ86WU2 507 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 NIM1KQ8IY84 436 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 GJA3Q9Y6H8 435 aa33.44■■■□□ 2.94
LAPTM4B-203ENST00000521545 DDX58O95786 925 aaKnown RBP33.43■■■□□ 2.94
LAPTM4B-203ENST00000521545 DPP8Q6V1X1 898 aaPredicted RBP33.43■■■□□ 2.94
LAPTM4B-203ENST00000521545 TMC4Q7Z404 712 aa33.43■■■□□ 2.94
LAPTM4B-203ENST00000521545 MPNDQ8N594 471 aa33.43■■■□□ 2.94
LAPTM4B-203ENST00000521545 TSR2Q969E8 191 aaKnown RBP33.43■■■□□ 2.94
LAPTM4B-203ENST00000521545 EAPPQ56P03 285 aaPredicted RBP33.42■■■□□ 2.94
LAPTM4B-203ENST00000521545 RTL5Q5HYW3 569 aaPredicted RBP33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms