RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
VEGFA-222ENST00000520948 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
VEGFA-222ENST00000520948 NBPF5PQ86XG9 351 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-222ENST00000520948 DDX21Q9NR30 783 aaKnown RBP eCLIP23.38■■□□□ 1.33
VEGFA-222ENST00000520948 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
VEGFA-222ENST00000520948 CHMP4AQ9BY43 222 aa23.37■■□□□ 1.33
VEGFA-222ENST00000520948 LTBP3Q9NS15 1303 aa23.36■■□□□ 1.33
VEGFA-222ENST00000520948 MYL6BP14649 208 aa23.36■■□□□ 1.33
VEGFA-222ENST00000520948 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
VEGFA-222ENST00000520948 DBF4Q9UBU7 674 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-222ENST00000520948 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
VEGFA-222ENST00000520948 ANXA1P04083 346 aa23.35■■□□□ 1.33
VEGFA-222ENST00000520948 CCDC30Q5VVM6 783 aa23.35■■□□□ 1.33
VEGFA-222ENST00000520948 FAM177BA6PVY3 158 aa23.34■■□□□ 1.33
VEGFA-222ENST00000520948 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
VEGFA-222ENST00000520948 DDNO94850 711 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-222ENST00000520948 COL13A1Q5TAT6 717 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-222ENST00000520948 NIP7Q9Y221 180 aaKnown RBP eCLIP23.33■■□□□ 1.33
VEGFA-222ENST00000520948 SOGA3Q5TF21 947 aa23.32■■□□□ 1.32
VEGFA-222ENST00000520948 TTLL7Q6ZT98 887 aa23.32■■□□□ 1.32
VEGFA-222ENST00000520948 HYPKQ9NX55 129 aa23.32■■□□□ 1.32
VEGFA-222ENST00000520948 RGL2O15211 777 aa23.31■■□□□ 1.32
VEGFA-222ENST00000520948 POTEIP0CG38 1075 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 POTEJP0CG39 1038 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 NPR1P16066 1061 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 HLFQ16534 295 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 COPS6Q7L5N1 327 aa23.3■■□□□ 1.32
VEGFA-222ENST00000520948 CACNA1FO60840 1977 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 ERVV-1B6SEH8 477 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 CCDC93Q567U6 631 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 TPTE2Q6XPS3 522 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
VEGFA-222ENST00000520948 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
VEGFA-222ENST00000520948 PCNTO95613 3336 aa23.28■■□□□ 1.32
VEGFA-222ENST00000520948 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
VEGFA-222ENST00000520948 TCERG1O14776 1098 aaKnown RBP23.27■■□□□ 1.32
VEGFA-222ENST00000520948 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-222ENST00000520948 CHADLQ6NUI6 762 aa23.27■■□□□ 1.32
VEGFA-222ENST00000520948 ZNF428Q96B54 188 aa23.27■■□□□ 1.32
VEGFA-222ENST00000520948 NUP98P52948 1817 aa23.26■■□□□ 1.31
VEGFA-222ENST00000520948 SLC4A2P04920 1241 aa23.26■■□□□ 1.31
VEGFA-222ENST00000520948 STK31Q9BXU1 1019 aa23.26■■□□□ 1.31
VEGFA-222ENST00000520948 ZNF277Q9NRM2 450 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-222ENST00000520948 SCN4AP35499 1836 aa23.25■■□□□ 1.31
VEGFA-222ENST00000520948 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-222ENST00000520948 HSPA1AP0DMV8 641 aaKnown RBP23.25■■□□□ 1.31
VEGFA-222ENST00000520948 HSPA1BP0DMV9 641 aaKnown RBP23.25■■□□□ 1.31
VEGFA-222ENST00000520948 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-222ENST00000520948 AIMP1Q12904 312 aaKnown RBP23.25■■□□□ 1.31
VEGFA-222ENST00000520948 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
VEGFA-222ENST00000520948 FKBP4Q02790 459 aaKnown RBP eCLIP23.24■■□□□ 1.31
VEGFA-222ENST00000520948 GIGYF2Q6Y7W6 1299 aaKnown RBP23.24■■□□□ 1.31
VEGFA-222ENST00000520948 G2E3Q7L622 706 aa23.24■■□□□ 1.31
VEGFA-222ENST00000520948 ZNF541Q9H0D2 1346 aa23.24■■□□□ 1.31
VEGFA-222ENST00000520948 ABCC12Q96J65 1359 aa23.24■■□□□ 1.31
VEGFA-222ENST00000520948 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
VEGFA-222ENST00000520948 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
VEGFA-222ENST00000520948 ZBTB3Q9H5J0 574 aa23.23■■□□□ 1.31
VEGFA-222ENST00000520948 CAPN15O75808 1086 aa23.22■■□□□ 1.31
VEGFA-222ENST00000520948 NUTM1Q86Y26 1132 aa23.22■■□□□ 1.31
VEGFA-222ENST00000520948 IQCA1LA6NCM1 817 aa23.21■■□□□ 1.31
VEGFA-222ENST00000520948 ALDH1L2Q3SY69 923 aa23.21■■□□□ 1.31
VEGFA-222ENST00000520948 TNS4Q8IZW8 715 aa23.21■■□□□ 1.31
VEGFA-222ENST00000520948 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
VEGFA-222ENST00000520948 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
VEGFA-222ENST00000520948 MKRN1Q9UHC7 482 aaKnown RBP23.21■■□□□ 1.31
VEGFA-222ENST00000520948 ZNF34Q8IZ26 560 aa23.2■■□□□ 1.3
VEGFA-222ENST00000520948 RTKN2Q8IZC4 609 aa23.2■■□□□ 1.3
VEGFA-222ENST00000520948 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
VEGFA-222ENST00000520948 L3MBTL3Q96JM7 780 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-222ENST00000520948 CREBZFQ9NS37 354 aa23.2■■□□□ 1.3
VEGFA-222ENST00000520948 GPTP24298 496 aa23.19■■□□□ 1.3
VEGFA-222ENST00000520948 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
VEGFA-222ENST00000520948 BRPF1P55201 1214 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-222ENST00000520948 FLIIQ13045 1269 aa23.18■■□□□ 1.3
VEGFA-222ENST00000520948 EAPPQ56P03 285 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-222ENST00000520948 LDHDQ86WU2 507 aa23.18■■□□□ 1.3
VEGFA-222ENST00000520948 SYNE4Q8N205 404 aa23.18■■□□□ 1.3
VEGFA-222ENST00000520948 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
VEGFA-222ENST00000520948 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
VEGFA-222ENST00000520948 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
VEGFA-222ENST00000520948 TCIRG1Q13488 830 aa23.17■■□□□ 1.3
VEGFA-222ENST00000520948 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
VEGFA-222ENST00000520948 ANKRD36CQ5JPF3 1778 aa23.17■■□□□ 1.3
VEGFA-222ENST00000520948 UBN2Q6ZU65 1347 aa23.16■■□□□ 1.3
VEGFA-222ENST00000520948 DDX58O95786 925 aaKnown RBP23.16■■□□□ 1.3
VEGFA-222ENST00000520948 CRY2Q49AN0 593 aa23.16■■□□□ 1.3
VEGFA-222ENST00000520948 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
VEGFA-222ENST00000520948 SNED1Q8TER0 1413 aa23.16■■□□□ 1.3
VEGFA-222ENST00000520948 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 PASKQ96RG2 1323 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 ADAMTSL1Q8N6G6 1762 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 HSP90AB3PQ58FF7 597 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 RPGRQ92834 1020 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms