RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	PSMD1	Q99460	953 aa		10.91	□□□□□ -0.66
PTK2-223	ENST00000520828	PCGF6	Q9BYE7	350 aa		10.91	□□□□□ -0.66
PTK2-223	ENST00000520828	KNSTRN	Q9Y448	316 aa		10.91	□□□□□ -0.66
PTK2-223	ENST00000520828	TNRC18	O15417	2968 aa	Predicted RBP	10.91	□□□□□ -0.66
PTK2-223	ENST00000520828	EPS15	P42566	896 aa		10.9	□□□□□ -0.66
PTK2-223	ENST00000520828	SCNN1D	P51172	638 aa		10.9	□□□□□ -0.66
PTK2-223	ENST00000520828	CC2D2B	Q6DHV5	1058 aa		10.9	□□□□□ -0.66
PTK2-223	ENST00000520828	BCOR	Q6W2J9	1755 aa		10.9	□□□□□ -0.67
PTK2-223	ENST00000520828	LTBP1	Q14766	1721 aa		10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	FAM177B	A6PVY3	158 aa		10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	GNAT3	A8MTJ3	354 aa		10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	DIAPH1	O60610	1272 aa	Known RBP	10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	GTF2E1	P29083	439 aa	Predicted RBP	10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	BRPF1	P55201	1214 aa	Predicted RBP	10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	LARGE2	Q8N3Y3	721 aa		10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	IL17RE	Q8NFR9	667 aa		10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
PTK2-223	ENST00000520828	CELF2	O95319	508 aa	Known RBP	10.88	□□□□□ -0.67
PTK2-223	ENST00000520828	PIP4K2A	P48426	406 aa	Predicted RBP	10.88	□□□□□ -0.67
PTK2-223	ENST00000520828	SAPCD2	Q86UD0	394 aa		10.88	□□□□□ -0.67
PTK2-223	ENST00000520828	GAS2L2	Q8NHY3	880 aa		10.88	□□□□□ -0.67
PTK2-223	ENST00000520828	HHIPL1	Q96JK4	782 aa		10.88	□□□□□ -0.67
PTK2-223	ENST00000520828	SNED1	Q8TER0	1413 aa		10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	BTBD11	A6QL63	1104 aa		10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	RGL2	O15211	777 aa		10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	GRIPAP1	Q4V328	841 aa		10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	NIM1K	Q8IY84	436 aa		10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	ADARB2	Q9NS39	739 aa	Known RBP	10.87	□□□□□ -0.67
PTK2-223	ENST00000520828	KCNQ3	O43525	872 aa		10.86	□□□□□ -0.67
PTK2-223	ENST00000520828	CIAPIN1	Q6FI81	312 aa		10.86	□□□□□ -0.67
PTK2-223	ENST00000520828	RPGR	Q92834	1020 aa	Known RBP	10.86	□□□□□ -0.67
PTK2-223	ENST00000520828	TIMELESS	Q9UNS1	1208 aa		10.86	□□□□□ -0.67
PTK2-223	ENST00000520828	USP16	Q9Y5T5	823 aa		10.86	□□□□□ -0.67
PTK2-223	ENST00000520828	COL4A5	P29400	1685 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	TRPM7	Q96QT4	1865 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	SOX10	P56693	466 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.85	□□□□□ -0.67	1e-6	■■■■□ 21.9
PTK2-223	ENST00000520828	NOG	Q13253	232 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	CRY2	Q49AN0	593 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	NYX	Q9GZU5	481 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	ZNF408	Q9H9D4	720 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	GPRC5D	Q9NZD1	345 aa		10.85	□□□□□ -0.67
PTK2-223	ENST00000520828	U2SURP	O15042	1029 aa	Known RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	PPIP5K2	O43314	1243 aa		10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	SNRPA1	P09661	255 aa	Known RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	HOXA10	P31260	410 aa	Predicted RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	PRPF38B	Q5VTL8	546 aa	Known RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	CEMIP	Q8WUJ3	1361 aa		10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	SIPA1L3	O60292	1781 aa	Predicted RBP	10.84	□□□□□ -0.67
PTK2-223	ENST00000520828	ABCC12	Q96J65	1359 aa		10.83	□□□□□ -0.68
PTK2-223	ENST00000520828	PRAMEF22	A3QJZ6	481 aa		10.83	□□□□□ -0.68
PTK2-223	ENST00000520828	HSPA5	P11021	654 aa	Known RBP	10.83	□□□□□ -0.68
PTK2-223	ENST00000520828	TMX4	Q9H1E5	349 aa	Predicted RBP	10.83	□□□□□ -0.68
PTK2-223	ENST00000520828	CASP8AP2	Q9UKL3	1982 aa		10.83	□□□□□ -0.68
PTK2-223	ENST00000520828	NPC1L1	Q9UHC9	1359 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	NBPF26	B4DH59	902 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	TCERG1	O14776	1098 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	PPEF1	O14829	653 aa	Predicted RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	GMPS	P49915	693 aa	Predicted RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	HLF	Q16534	295 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	NBPF10	Q6P3W6	841 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	CDC37L1	Q7L3B6	337 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	NUTM1	Q86Y26	1132 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	NBPF15	Q8N660	670 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	ZC3H15	Q8WU90	426 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	RBM17	Q96I25	401 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	PGAP2	Q9UHJ9	254 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	ZNRF3	Q9ULT6	936 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	KIF7	Q2M1P5	1343 aa		10.82	□□□□□ -0.68
PTK2-223	ENST00000520828	HUNK	P57058	714 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	CXCL9	Q07325	125 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	REM2	Q8IYK8	340 aa	Predicted RBP	10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	CRAMP1	Q96RY5	1269 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	ZIC5	Q96T25	663 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	BCL2L13	Q9BXK5	485 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	VPS33B	Q9H267	617 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	SAGE1	Q9NXZ1	904 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	CDHR2	Q9BYE9	1310 aa		10.81	□□□□□ -0.68
PTK2-223	ENST00000520828	AOC3	Q16853	763 aa		10.8	□□□□□ -0.68
PTK2-223	ENST00000520828	SUPT20H	Q8NEM7	779 aa		10.8	□□□□□ -0.68
PTK2-223	ENST00000520828	RIC1	Q4ADV7	1423 aa		10.8	□□□□□ -0.68
PTK2-223	ENST00000520828	PDE4DIP	Q5VU43	2346 aa		10.8	□□□□□ -0.68
PTK2-223	ENST00000520828	ERVV-1	B6SEH8	477 aa		10.79	□□□□□ -0.68
PTK2-223	ENST00000520828	TNIP1	Q15025	636 aa		10.79	□□□□□ -0.68
PTK2-223	ENST00000520828	RGMB	Q6NW40	437 aa		10.79	□□□□□ -0.68
PTK2-223	ENST00000520828	USP48	Q86UV5	1035 aa		10.79	□□□□□ -0.68
PTK2-223	ENST00000520828	RTF1	Q92541	710 aa	Known RBP	10.79	□□□□□ -0.68
PTK2-223	ENST00000520828	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	HIRA	P54198	1017 aa	Predicted RBP	10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	CC2D1B	Q5T0F9	858 aa	Known RBP	10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	KIF6	Q6ZMV9	814 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	SLC51A	Q86UW1	340 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	NGEF	Q8N5V2	710 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	TRPM4	Q8TD43	1214 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	CCDC102A	Q96A19	550 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	PHACTR3	Q96KR7	559 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	ATP6V0A2	Q9Y487	856 aa		10.78	□□□□□ -0.68
PTK2-223	ENST00000520828	COL3A1	P02461	1466 aa	Predicted RBP	10.78	□□□□□ -0.68

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