RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RHPN1Q8TCX5 695 aa7.9□□□□□ -1.14
SQLE-204ENST00000520493 HINFPQ9BQA5 517 aa7.9□□□□□ -1.14
SQLE-204ENST00000520493 KRTAP4-9Q9BYQ8 210 aa7.9□□□□□ -1.14
SQLE-204ENST00000520493 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
SQLE-204ENST00000520493 ARID1BQ8NFD5 2236 aaPredicted RBP7.9□□□□□ -1.15
SQLE-204ENST00000520493 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 EML1O00423 815 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 FAM157BP0CG42 384 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 CD33P20138 364 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 HIRAP54198 1017 aaPredicted RBP7.89□□□□□ -1.15
SQLE-204ENST00000520493 DPYDQ12882 1025 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 PTK7Q13308 1070 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 FZD5Q13467 585 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
SQLE-204ENST00000520493 COL17A1Q9UMD9 1497 aaPredicted RBP7.88□□□□□ -1.15
SQLE-204ENST00000520493 DKK1O94907 266 aa7.88□□□□□ -1.15
SQLE-204ENST00000520493 MAPTP10636 758 aaKnown RBP7.88□□□□□ -1.15
SQLE-204ENST00000520493 ELNP15502 786 aa7.88□□□□□ -1.15
SQLE-204ENST00000520493 TRIM28Q13263 835 aaKnown RBP7.88□□□□□ -1.15
SQLE-204ENST00000520493 C1orf53Q5VUE5 145 aa7.88□□□□□ -1.15
SQLE-204ENST00000520493 ANKIB1Q9P2G1 1089 aa7.88□□□□□ -1.15
SQLE-204ENST00000520493 RFX1P22670 979 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 TNP2Q05952 138 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 LAMC2Q13753 1193 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 HIF1AQ16665 826 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 CFAP70Q5T0N1 1121 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 LRRC69Q6ZNQ3 347 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 STAG2Q8N3U4 1231 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
SQLE-204ENST00000520493 SCG3Q8WXD2 468 aaKnown RBP7.87□□□□□ -1.15
SQLE-204ENST00000520493 PRR12Q9ULL5 1215 aa7.87□□□□□ -1.15
SQLE-204ENST00000520493 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
SQLE-204ENST00000520493 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
SQLE-204ENST00000520493 FMNL2Q96PY5 1086 aa7.86□□□□□ -1.15
SQLE-204ENST00000520493 PHACTR1Q9C0D0 580 aa7.86□□□□□ -1.15
SQLE-204ENST00000520493 AVENQ9NQS1 362 aaPredicted RBP7.86□□□□□ -1.15
SQLE-204ENST00000520493 HCN4Q9Y3Q4 1203 aa7.86□□□□□ -1.15
SQLE-204ENST00000520493 SH3PXD2AQ5TCZ1 1133 aa7.85□□□□□ -1.15
SQLE-204ENST00000520493 POTEAQ6S8J7 498 aa7.85□□□□□ -1.15
SQLE-204ENST00000520493 FAM200AQ8TCP9 573 aa7.85□□□□□ -1.15
SQLE-204ENST00000520493 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
SQLE-204ENST00000520493 MARK1Q9P0L2 795 aa7.85□□□□□ -1.15
SQLE-204ENST00000520493 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
SQLE-204ENST00000520493 ALAS2P22557 587 aa7.84□□□□□ -1.15
SQLE-204ENST00000520493 TP53INP1Q96A56 240 aa7.84□□□□□ -1.15
SQLE-204ENST00000520493 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
SQLE-204ENST00000520493 C21orf2O43822 256 aa7.83□□□□□ -1.16
SQLE-204ENST00000520493 IGFBP4P22692 258 aa7.83□□□□□ -1.16
SQLE-204ENST00000520493 ALDH16A1Q8IZ83 802 aa7.83□□□□□ -1.16
SQLE-204ENST00000520493 VTI1AQ96AJ9 217 aa7.83□□□□□ -1.16
SQLE-204ENST00000520493 KRTAP4-2Q9BYR5 136 aa7.83□□□□□ -1.16
SQLE-204ENST00000520493 ELOA3CA0A087WX78 387 aaPredicted RBP7.82□□□□□ -1.16
SQLE-204ENST00000520493 ELOA3DA6NLF2 546 aaPredicted RBP7.82□□□□□ -1.16
SQLE-204ENST00000520493 C9orf172C9J069 976 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 EFSO43281 561 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 ELOA3BQ3SY89 546 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 ZNF468Q5VIY5 522 aaPredicted RBP7.82□□□□□ -1.16
SQLE-204ENST00000520493 ELOA3Q8NG57 546 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 NGLY1Q96IV0 654 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 CEP63Q96MT8 703 aa7.82□□□□□ -1.16
SQLE-204ENST00000520493 NOVA2Q9UNW9 492 aaKnown RBP7.82□□□□□ -1.16
SQLE-204ENST00000520493 M0R082 166 aa7.81□□□□□ -1.16
SQLE-204ENST00000520493 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
SQLE-204ENST00000520493 ZNF417Q8TAU3 575 aa7.81□□□□□ -1.16
SQLE-204ENST00000520493 ZNF587Q96SQ5 575 aaPredicted RBP7.81□□□□□ -1.16
SQLE-204ENST00000520493 SERPINA10Q9UK55 444 aa7.81□□□□□ -1.16
SQLE-204ENST00000520493 ADGRE1Q14246 886 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 RTN1Q16799 776 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 TXNRD3Q86VQ6 643 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 C7orf43Q8WVR3 580 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 HSH2DQ96JZ2 352 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 SUSD3Q96L08 255 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.8□□□□□ -1.16
SQLE-204ENST00000520493 PCMTD2Q9NV79 361 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
SQLE-204ENST00000520493 FOXO3O43524 673 aa7.79□□□□□ -1.16
SQLE-204ENST00000520493 LGR5O75473 907 aa7.79□□□□□ -1.16
SQLE-204ENST00000520493 IRAK1P51617 712 aa7.79□□□□□ -1.16
SQLE-204ENST00000520493 COL9A3Q14050 684 aaPredicted RBP7.79□□□□□ -1.16
SQLE-204ENST00000520493 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
SQLE-204ENST00000520493 ELOAQ14241 798 aaKnown RBP7.78□□□□□ -1.16
SQLE-204ENST00000520493 SWI5Q1ZZU3 235 aa7.78□□□□□ -1.16
SQLE-204ENST00000520493 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
SQLE-204ENST00000520493 SELPP16109 830 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 WEE1P30291 646 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 TYRO3Q06418 890 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 TRAPPC3LQ5T215 181 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 HOMEZQ8IX15 550 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 ZNF280CQ8ND82 737 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 RNF114Q9Y508 228 aa7.77□□□□□ -1.17
SQLE-204ENST00000520493 ACIN1Q9UKV3 1341 aaKnown RBP7.77□□□□□ -1.17
SQLE-204ENST00000520493 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
SQLE-204ENST00000520493 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
SQLE-204ENST00000520493 SFSWAPQ12872 951 aaKnown RBP7.76□□□□□ -1.17
SQLE-204ENST00000520493 IER5Q5VY09 327 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms