RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 TUBGCP6Q96RT7 1819 aa19.87■□□□□ 0.77
SNHG6-201ENST00000520348 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
SNHG6-201ENST00000520348 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
SNHG6-201ENST00000520348 SURF6O75683 361 aaKnown RBP19.86■□□□□ 0.77
SNHG6-201ENST00000520348 RHPN1Q8TCX5 695 aa19.86■□□□□ 0.77
SNHG6-201ENST00000520348 KIF1BPQ96EK5 621 aa19.86■□□□□ 0.77
SNHG6-201ENST00000520348 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
SNHG6-201ENST00000520348 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
SNHG6-201ENST00000520348 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
SNHG6-201ENST00000520348 AOX1Q06278 1338 aa19.85■□□□□ 0.77
SNHG6-201ENST00000520348 ERC1Q8IUD2 1116 aa19.85■□□□□ 0.77
SNHG6-201ENST00000520348 ZBTB38Q8NAP3 1195 aaPredicted RBP19.85■□□□□ 0.77
SNHG6-201ENST00000520348 OTUD7AQ8TE49 926 aaPredicted RBP19.85■□□□□ 0.77
SNHG6-201ENST00000520348 STAP2Q9UGK3 403 aa19.85■□□□□ 0.77
SNHG6-201ENST00000520348 C16orf71Q8IYS4 520 aaPredicted RBP19.84■□□□□ 0.77
SNHG6-201ENST00000520348 LAMB2P55268 1798 aa19.83■□□□□ 0.77
SNHG6-201ENST00000520348 UBN2Q6ZU65 1347 aa19.83■□□□□ 0.77
SNHG6-201ENST00000520348 USP42Q9H9J4 1324 aaKnown RBP19.83■□□□□ 0.77
SNHG6-201ENST00000520348 RPS6KA4O75676 772 aa19.83■□□□□ 0.77
SNHG6-201ENST00000520348 TTC22Q5TAA0 569 aa19.83■□□□□ 0.77
SNHG6-201ENST00000520348 CCNL1Q9UK58 526 aaPredicted RBP19.83■□□□□ 0.77
SNHG6-201ENST00000520348 TBC1D2BQ9UPU7 963 aa19.83■□□□□ 0.77
SNHG6-201ENST00000520348 GSPT1P15170 499 aaKnown RBP19.82■□□□□ 0.76
SNHG6-201ENST00000520348 CLEC4GQ6UXB4 293 aa19.82■□□□□ 0.76
SNHG6-201ENST00000520348 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
SNHG6-201ENST00000520348 COL24A1Q17RW2 1714 aa19.82■□□□□ 0.76
SNHG6-201ENST00000520348 PDE1AP54750 535 aa19.81■□□□□ 0.76
SNHG6-201ENST00000520348 PTPN12Q05209 780 aaKnown RBP19.81■□□□□ 0.76
SNHG6-201ENST00000520348 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
SNHG6-201ENST00000520348 JARID2Q92833 1246 aaPredicted RBP19.81■□□□□ 0.76
SNHG6-201ENST00000520348 PA2G4Q9UQ80 394 aaKnown RBP19.81■□□□□ 0.76
SNHG6-201ENST00000520348 LRP5O75197 1615 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 C4AP0C0L4 1744 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 APBB1O00213 710 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 CSF1RP07333 972 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 LMBR1LQ6UX01 489 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 RGS17Q9UGC6 210 aaPredicted RBP19.8■□□□□ 0.76
SNHG6-201ENST00000520348 RGPD3A6NKT7 1758 aaPredicted RBP19.8■□□□□ 0.76
SNHG6-201ENST00000520348 RGPD4Q7Z3J3 1758 aa19.8■□□□□ 0.76
SNHG6-201ENST00000520348 SLC27A3Q5K4L6 730 aa19.79■□□□□ 0.76
SNHG6-201ENST00000520348 AK7Q96M32 723 aa19.79■□□□□ 0.76
SNHG6-201ENST00000520348 MYH3P11055 1940 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 SASH1O94885 1247 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 MX1P20591 662 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 GPTP24298 496 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 RXRBP28702 533 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 ZNF652Q9Y2D9 606 aa19.78■□□□□ 0.76
SNHG6-201ENST00000520348 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
SNHG6-201ENST00000520348 DDX60Q8IY21 1712 aaKnown RBP19.77■□□□□ 0.76
SNHG6-201ENST00000520348 TNS1Q9HBL0 1735 aaKnown RBP19.77■□□□□ 0.76
SNHG6-201ENST00000520348 NARFQ9UHQ1 456 aa19.77■□□□□ 0.76
SNHG6-201ENST00000520348 FBXO3Q9UK99 471 aa19.77■□□□□ 0.76
SNHG6-201ENST00000520348 KCNQ4P56696 695 aa19.76■□□□□ 0.75
SNHG6-201ENST00000520348 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNHG6-201ENST00000520348 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
SNHG6-201ENST00000520348 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
SNHG6-201ENST00000520348 IL1RAPL2Q9NP60 686 aa19.76■□□□□ 0.75
SNHG6-201ENST00000520348 LRRC4BQ9NT99 713 aa19.76■□□□□ 0.75
SNHG6-201ENST00000520348 CIAO1O76071 339 aa19.75■□□□□ 0.75
SNHG6-201ENST00000520348 NTSR2O95665 410 aa19.75■□□□□ 0.75
SNHG6-201ENST00000520348 HMGB2P26583 209 aaKnown RBP19.75■□□□□ 0.75
SNHG6-201ENST00000520348 CLASRPQ8N2M8 674 aaKnown RBP19.75■□□□□ 0.75
SNHG6-201ENST00000520348 ARXQ96QS3 562 aa19.75■□□□□ 0.75
SNHG6-201ENST00000520348 TTC41PQ6P2S7 1318 aa19.75■□□□□ 0.75
SNHG6-201ENST00000520348 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 GNPATO15228 680 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 SEC24BO95487 1268 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 ADRA2BP18089 450 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 OS9Q13438 667 aaPredicted RBP19.74■□□□□ 0.75
SNHG6-201ENST00000520348 SUSD4Q5VX71 490 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
SNHG6-201ENST00000520348 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
SNHG6-201ENST00000520348 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
SNHG6-201ENST00000520348 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
SNHG6-201ENST00000520348 PDE8AO60658 829 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 CDC45O75419 566 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 TRIM37O94972 964 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 CTSWP56202 376 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
SNHG6-201ENST00000520348 KLHDC4Q8TBB5 520 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 PI4K2BQ8TCG2 481 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 GPR108Q9NPR9 543 aa19.73■□□□□ 0.75
SNHG6-201ENST00000520348 PLSCR1O15162 318 aa19.72■□□□□ 0.75
SNHG6-201ENST00000520348 SDSP20132 328 aa19.72■□□□□ 0.75
SNHG6-201ENST00000520348 POTEAQ6S8J7 498 aa19.72■□□□□ 0.75
SNHG6-201ENST00000520348 ATG9AQ7Z3C6 839 aa19.72■□□□□ 0.75
SNHG6-201ENST00000520348 TTLL11Q8NHH1 800 aa19.72■□□□□ 0.75
SNHG6-201ENST00000520348 UTP14AQ9BVJ6 771 aaKnown RBP19.72■□□□□ 0.75
SNHG6-201ENST00000520348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.72■□□□□ 0.75
SNHG6-201ENST00000520348 EYA2O00167 538 aa19.71■□□□□ 0.75
SNHG6-201ENST00000520348 AMIGO3Q86WK7 504 aa19.71■□□□□ 0.75
SNHG6-201ENST00000520348 SYNE4Q8N205 404 aa19.71■□□□□ 0.75
SNHG6-201ENST00000520348 EAF2Q96CJ1 260 aaPredicted RBP19.71■□□□□ 0.75
SNHG6-201ENST00000520348 NIP7Q9Y221 180 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNHG6-201ENST00000520348 IL15P40933 162 aaPredicted RBP19.7■□□□□ 0.74
SNHG6-201ENST00000520348 TBC1D9Q6ZT07 1266 aa19.7■□□□□ 0.74
SNHG6-201ENST00000520348 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
SNHG6-201ENST00000520348 SIL1Q9H173 461 aa19.7■□□□□ 0.74
SNHG6-201ENST00000520348 HSP90B1P14625 803 aaKnown RBP19.69■□□□□ 0.74
SNHG6-201ENST00000520348 PROM2Q8N271 834 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms