RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 PPP1R42Q7Z4L9 355 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 TBC1D32Q96NH3 1257 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 TEX13AQ9BXU3 409 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 C9orf78Q9NZ63 289 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 AK9Q5TCS8 1911 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 SLIT2O94813 1529 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 NEURL1BA8MQ27 555 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 GRM8O00222 908 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 CDC45O75419 566 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 AIMP1Q12904 312 aaKnown RBP8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 C16orf71Q8IYS4 520 aaPredicted RBP8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 PLBD2Q8NHP8 589 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 USP35Q9P2H5 1018 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 EXOC6BQ9Y2D4 811 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 COL15A1P39059 1388 aa8.21□□□□□ -1.1
IGHV3-57-201ENST00000520143 DOT1LQ8TEK3 1739 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 UBAP1LF5GYI3 381 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SNPHO15079 494 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SRGAP3O43295 1099 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 CWF19L2Q2TBE0 894 aaKnown RBP8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 PIGBQ92521 554 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 STAP2Q9UGK3 403 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 AOX1Q06278 1338 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 SALL3Q9BXA9 1300 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 BCL9O00512 1426 aa8.2□□□□□ -1.1
IGHV3-57-201ENST00000520143 APBB1O00213 710 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 ADAMTS2O95450 1211 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 GSPT1P15170 499 aaKnown RBP8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 PDE1AP54750 535 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 PIP4K2BP78356 416 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 GCKRQ14397 625 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 BARGINQ6ZT62 677 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 KIF1BPQ96EK5 621 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 MYD88Q99836 296 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 C22orf23Q9BZE7 217 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 JCADQ9P266 1359 aa8.19□□□□□ -1.1
IGHV3-57-201ENST00000520143 CICQ96RK0 1608 aaPredicted RBP8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 TJP1Q07157 1748 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 PTCD1O75127 700 aaKnown RBP8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 RBM25P49756 843 aaKnown RBP8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 BECN1Q14457 450 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 DDB1Q16531 1140 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 TBC1D9Q6ZT07 1266 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 RHPN1Q8TCX5 695 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 OTUD7AQ8TE49 926 aaPredicted RBP8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 SUCLG2Q96I99 432 aa8.18□□□□□ -1.1
IGHV3-57-201ENST00000520143 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 NUTM2BA6NNL0 878 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 NUTM2EB1AL46 878 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 PPP1R37O75864 691 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 STARD3NLO95772 234 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 A1BGP04217 495 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 SDSP20132 328 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 MX1P20591 662 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 NUTM2AQ8IVF1 878 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 KAZALD1Q96I82 304 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 ANP32EQ9BTT0 268 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 ZNF831Q5JPB2 1677 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 NUP98P52948 1817 aa8.17□□□□□ -1.1
IGHV3-57-201ENST00000520143 H7C1W4 665 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 PIP4K2AP48426 406 aaPredicted RBP8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 CASP7P55210 303 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 RABL6Q3YEC7 729 aaPredicted RBP8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 TTLL7Q6ZT98 887 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 UNC5CLQ8IV45 518 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 CCDC191Q8NCU4 936 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 RREB1Q92766 1687 aa8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 BICC1Q9H694 974 aaKnown RBP8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
IGHV3-57-201ENST00000520143 TTC41PQ6P2S7 1318 aa8.15□□□□□ -1.1
IGHV3-57-201ENST00000520143 A0A087WZG4 1122 aa8.15□□□□□ -1.1
IGHV3-57-201ENST00000520143 ST18O60284 1047 aa8.15□□□□□ -1.1
IGHV3-57-201ENST00000520143 G3BP1Q13283 466 aaKnown RBP eCLIP8.15□□□□□ -1.1
IGHV3-57-201ENST00000520143 OS9Q13438 667 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-57-201ENST00000520143 VPS72Q15906 364 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms