RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 TCIRG1Q13488 830 aa32■■■□□ 2.71
LAPTM4B-202ENST00000517924 WWC1Q8IX03 1113 aa32■■■□□ 2.71
LAPTM4B-202ENST00000517924 TSR2Q969E8 191 aaKnown RBP32■■■□□ 2.71
LAPTM4B-202ENST00000517924 UTP14AQ9BVJ6 771 aaKnown RBP32■■■□□ 2.71
LAPTM4B-202ENST00000517924 TAOK3Q9H2K8 898 aa32■■■□□ 2.71
LAPTM4B-202ENST00000517924 LTBP3Q9NS15 1303 aa32■■■□□ 2.71
LAPTM4B-202ENST00000517924 SLC51AQ86UW1 340 aa31.99■■■□□ 2.71
LAPTM4B-202ENST00000517924 NLRP10Q86W26 655 aa31.99■■■□□ 2.71
LAPTM4B-202ENST00000517924 SYNE4Q8N205 404 aa31.99■■■□□ 2.71
LAPTM4B-202ENST00000517924 TSPYL6Q8N831 410 aa31.98■■■□□ 2.71
LAPTM4B-202ENST00000517924 KDM2BQ8NHM5 1336 aa31.98■■■□□ 2.71
LAPTM4B-202ENST00000517924 ZC3H4Q9UPT8 1303 aaKnown RBP31.98■■■□□ 2.71
LAPTM4B-202ENST00000517924 CCDC27Q2M243 656 aa31.97■■■□□ 2.71
LAPTM4B-202ENST00000517924 PLBD2Q8NHP8 589 aa31.97■■■□□ 2.71
LAPTM4B-202ENST00000517924 ALDH1B1P30837 517 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 CCDC93Q567U6 631 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 HSP90AB3PQ58FF7 597 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 SOGA3Q5TF21 947 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 ANKRD13DQ6ZTN6 518 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 RPGRQ92834 1020 aaKnown RBP31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 RRAGCQ9HB90 399 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 HYPKQ9NX55 129 aa31.96■■■□□ 2.71
LAPTM4B-202ENST00000517924 PHAXQ9H814 394 aaKnown RBP31.95■■■□□ 2.71
LAPTM4B-202ENST00000517924 HOXA10P31260 410 aaPredicted RBP31.94■■■□□ 2.7
LAPTM4B-202ENST00000517924 SALL2Q9Y467 1007 aaPredicted RBP31.94■■■□□ 2.7
LAPTM4B-202ENST00000517924 TAF1P21675 1872 aa31.93■■■□□ 2.7
LAPTM4B-202ENST00000517924 DDX60Q8IY21 1712 aaKnown RBP31.93■■■□□ 2.7
LAPTM4B-202ENST00000517924 GLTPD2A6NH11 291 aa31.93■■■□□ 2.7
LAPTM4B-202ENST00000517924 SLC10A5Q5PT55 438 aa31.93■■■□□ 2.7
LAPTM4B-202ENST00000517924 SNED1Q8TER0 1413 aa31.92■■■□□ 2.7
LAPTM4B-202ENST00000517924 ATP5J2-PTCD1G3V325 749 aa31.92■■■□□ 2.7
LAPTM4B-202ENST00000517924 HCLS1P14317 486 aaPredicted RBP31.92■■■□□ 2.7
LAPTM4B-202ENST00000517924 ZNF277Q9NRM2 450 aaPredicted RBP31.91■■■□□ 2.7
LAPTM4B-202ENST00000517924 TRMT112Q9UI30 125 aaKnown RBP31.91■■■□□ 2.7
LAPTM4B-202ENST00000517924 TOMM70O94826 608 aa31.9■■■□□ 2.7
LAPTM4B-202ENST00000517924 FKBP4Q02790 459 aaKnown RBP eCLIP31.9■■■□□ 2.7
LAPTM4B-202ENST00000517924 FAM9BQ8IZU0 186 aa31.9■■■□□ 2.7
LAPTM4B-202ENST00000517924 NLRP3Q96P20 1036 aa31.9■■■□□ 2.7
LAPTM4B-202ENST00000517924 ISCA1Q9BUE6 129 aa31.9■■■□□ 2.7
LAPTM4B-202ENST00000517924 RBM17Q96I25 401 aaKnown RBP31.89■■■□□ 2.7
LAPTM4B-202ENST00000517924 TCERG1O14776 1098 aaKnown RBP31.88■■■□□ 2.69
LAPTM4B-202ENST00000517924 CRAMP1Q96RY5 1269 aa31.88■■■□□ 2.69
LAPTM4B-202ENST00000517924 RNF123Q5XPI4 1314 aa31.88■■■□□ 2.69
LAPTM4B-202ENST00000517924 WDR90Q96KV7 1748 aa31.87■■■□□ 2.69
LAPTM4B-202ENST00000517924 SH3TC1Q8TE82 1336 aa31.87■■■□□ 2.69
LAPTM4B-202ENST00000517924 RTKN2Q8IZC4 609 aa31.87■■■□□ 2.69
LAPTM4B-202ENST00000517924 CEP350Q5VT06 3117 aa31.87■■■□□ 2.69
LAPTM4B-202ENST00000517924 IL16Q14005 1332 aa31.85■■■□□ 2.69
LAPTM4B-202ENST00000517924 HSPA6P17066 643 aa31.85■■■□□ 2.69
LAPTM4B-202ENST00000517924 CCDC30Q5VVM6 783 aa31.85■■■□□ 2.69
LAPTM4B-202ENST00000517924 RIC3Q7Z5B4 369 aa31.85■■■□□ 2.69
LAPTM4B-202ENST00000517924 ABCC4O15439 1325 aa31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 POTECB2RU33 542 aa31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 PPEF1O14829 653 aaPredicted RBP31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 NCBP3Q53F19 620 aaKnown RBP31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 C16orf71Q8IYS4 520 aaPredicted RBP31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 FAM89AQ96GI7 184 aa31.84■■■□□ 2.69
LAPTM4B-202ENST00000517924 GOLGA2Q08379 1002 aa31.83■■■□□ 2.69
LAPTM4B-202ENST00000517924 RTL5Q5HYW3 569 aaPredicted RBP31.83■■■□□ 2.69
LAPTM4B-202ENST00000517924 COL4A5P29400 1685 aa31.83■■■□□ 2.69
LAPTM4B-202ENST00000517924 FANCIQ9NVI1 1328 aa31.82■■■□□ 2.68
LAPTM4B-202ENST00000517924 DDNO94850 711 aaPredicted RBP31.82■■■□□ 2.68
LAPTM4B-202ENST00000517924 RBM46Q8TBY0 533 aaKnown RBP31.82■■■□□ 2.68
LAPTM4B-202ENST00000517924 TWISTNBQ3B726 338 aaPredicted RBP31.81■■■□□ 2.68
LAPTM4B-202ENST00000517924 DPY19L2Q6NUT2 758 aa31.81■■■□□ 2.68
LAPTM4B-202ENST00000517924 COL4A1P02462 1669 aa31.8■■■□□ 2.68
LAPTM4B-202ENST00000517924 VEGFAP15692 232 aaPredicted RBP31.8■■■□□ 2.68
LAPTM4B-202ENST00000517924 MYD88Q99836 296 aa31.8■■■□□ 2.68
LAPTM4B-202ENST00000517924 ZNF541Q9H0D2 1346 aa31.79■■■□□ 2.68
LAPTM4B-202ENST00000517924 IARSP41252 1262 aaKnown RBP31.79■■■□□ 2.68
LAPTM4B-202ENST00000517924 PSMD1Q99460 953 aa31.79■■■□□ 2.68
LAPTM4B-202ENST00000517924 SPINK5Q9NQ38 1064 aaPredicted RBP31.79■■■□□ 2.68
LAPTM4B-202ENST00000517924 TRIM28Q13263 835 aaKnown RBP31.78■■■□□ 2.68
LAPTM4B-202ENST00000517924 CC2D2BQ6DHV5 1058 aa31.78■■■□□ 2.68
LAPTM4B-202ENST00000517924 WDR63Q8IWG1 891 aa31.78■■■□□ 2.68
LAPTM4B-202ENST00000517924 G2E3Q7L622 706 aa31.77■■■□□ 2.68
LAPTM4B-202ENST00000517924 ATP6V0A2Q9Y487 856 aa31.76■■■□□ 2.67
LAPTM4B-202ENST00000517924 MAP3K2Q9Y2U5 619 aa31.75■■■□□ 2.67
LAPTM4B-202ENST00000517924 DDX46Q7L014 1031 aaKnown RBP31.74■■■□□ 2.67
LAPTM4B-202ENST00000517924 JARID2Q92833 1246 aaPredicted RBP31.74■■■□□ 2.67
LAPTM4B-202ENST00000517924 METTL22Q9BUU2 404 aaPredicted RBP31.74■■■□□ 2.67
LAPTM4B-202ENST00000517924 STK31Q9BXU1 1019 aa31.74■■■□□ 2.67
LAPTM4B-202ENST00000517924 IRS4O14654 1257 aaPredicted RBP31.73■■■□□ 2.67
LAPTM4B-202ENST00000517924 CACNA1FO60840 1977 aa31.73■■■□□ 2.67
LAPTM4B-202ENST00000517924 PI4KAP2A4QPH2 592 aa31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 DDX58O95786 925 aaKnown RBP31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 EXOSC9Q06265 439 aaKnown RBP31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 GRAPQ13588 217 aa31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 PI4KAP1Q8N8J0 262 aa31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 GRAPLQ8TC17 118 aaPredicted RBP31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 CHMP4AQ9BY43 222 aa31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 LRRC37AA6NMS7 1700 aa31.72■■■□□ 2.67
LAPTM4B-202ENST00000517924 FZD9O00144 591 aa31.71■■■□□ 2.67
LAPTM4B-202ENST00000517924 SLC4A2P04920 1241 aa31.71■■■□□ 2.67
LAPTM4B-202ENST00000517924 FSTL1Q12841 308 aa31.71■■■□□ 2.67
LAPTM4B-202ENST00000517924 ZBTB38Q8NAP3 1195 aaPredicted RBP31.71■■■□□ 2.67
LAPTM4B-202ENST00000517924 SCN4AP35499 1836 aa31.7■■■□□ 2.67
LAPTM4B-202ENST00000517924 BBOX1O75936 387 aa31.7■■■□□ 2.67
LAPTM4B-202ENST00000517924 SF3B3Q15393 1217 aaKnown RBP31.7■■■□□ 2.67
LAPTM4B-202ENST00000517924 KSR2Q6VAB6 950 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms