RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 RRP1P56182 461 aaKnown RBP7.64□□□□□ -1.19
CD47-205ENST00000517766 IRX6P78412 446 aaPredicted RBP7.64□□□□□ -1.19
CD47-205ENST00000517766 RASSF7Q02833 373 aa7.64□□□□□ -1.19
CD47-205ENST00000517766 SLFN5Q08AF3 891 aa7.64□□□□□ -1.19
CD47-205ENST00000517766 CCDC27Q2M243 656 aa7.64□□□□□ -1.19
CD47-205ENST00000517766 TRIM34Q9BYJ4 488 aa7.64□□□□□ -1.19
CD47-205ENST00000517766 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 SENP3-EIF4A1A0A087X0R7 540 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 DIAPH1O60610 1272 aaKnown RBP7.63□□□□□ -1.19
CD47-205ENST00000517766 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
CD47-205ENST00000517766 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
CD47-205ENST00000517766 FOXC1Q12948 553 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 NR6A1Q15406 480 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 WDR63Q8IWG1 891 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 TRMT2AQ8IZ69 625 aaKnown RBP7.63□□□□□ -1.19
CD47-205ENST00000517766 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.63□□□□□ -1.19
CD47-205ENST00000517766 IRF7Q92985 503 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 COG3Q96JB2 828 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 PCDHB3Q9Y5E6 796 aa7.63□□□□□ -1.19
CD47-205ENST00000517766 NKTRP30414 1462 aaKnown RBP7.62□□□□□ -1.19
CD47-205ENST00000517766 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
CD47-205ENST00000517766 TTC21AQ8NDW8 1320 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 IRF5Q13568 498 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 RETREG3Q86VR2 466 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.62□□□□□ -1.19
CD47-205ENST00000517766 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 KRTAP4-12Q9BQ66 201 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 NXF1Q9UBU9 619 aaKnown RBP7.62□□□□□ -1.19
CD47-205ENST00000517766 NDUFB9Q9Y6M9 179 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 USP54Q70EL1 1684 aa7.62□□□□□ -1.19
CD47-205ENST00000517766 NPHP4O75161 1426 aaPredicted RBP7.61□□□□□ -1.19
CD47-205ENST00000517766 USP6P35125 1406 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 ACEP12821 1306 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 ERBB4Q15303 1308 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 TTC21BQ7Z4L5 1316 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 MAPK8IP3Q9UPT6 1336 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 NEFMP07197 916 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 Q3C1V9 767 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 TCP11L2Q8N4U5 519 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 NECTIN2Q92692 538 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 NWD1Q149M9 1564 aa7.61□□□□□ -1.19
CD47-205ENST00000517766 U2SURPO15042 1029 aaKnown RBP7.6□□□□□ -1.19
CD47-205ENST00000517766 KCNA6P17658 529 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 BRICD5Q6PL45 260 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 NME9Q86XW9 330 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
CD47-205ENST00000517766 PRR14Q9BWN1 585 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 SENP2Q9HC62 589 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 POLKQ9UBT6 870 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 LRRC7Q96NW7 1537 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 DLG5Q8TDM6 1919 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 SSH2Q76I76 1423 aa7.6□□□□□ -1.19
CD47-205ENST00000517766 GPR37L1O60883 481 aa7.59□□□□□ -1.19
CD47-205ENST00000517766 VAC14Q08AM6 782 aa7.59□□□□□ -1.19
CD47-205ENST00000517766 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
CD47-205ENST00000517766 PLEKHF1Q96S99 279 aa7.59□□□□□ -1.19
CD47-205ENST00000517766 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
CD47-205ENST00000517766 OVOS2A0A0J9YW53 1432 aa7.59□□□□□ -1.19
CD47-205ENST00000517766 OVOS2Q6IE36 1432 aa7.59□□□□□ -1.19
CD47-205ENST00000517766 USP31Q70CQ4 1352 aa7.59□□□□□ -1.2
CD47-205ENST00000517766 NR1I2O75469 434 aa7.58□□□□□ -1.2
CD47-205ENST00000517766 FMNL1O95466 1100 aaPredicted RBP7.58□□□□□ -1.2
CD47-205ENST00000517766 NGDNQ8NEJ9 315 aaKnown RBP7.58□□□□□ -1.2
CD47-205ENST00000517766 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
CD47-205ENST00000517766 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
CD47-205ENST00000517766 PIK3C2AO00443 1686 aa7.57□□□□□ -1.2
CD47-205ENST00000517766 CT47B1P0C2W7 299 aaPredicted RBP7.57□□□□□ -1.2
CD47-205ENST00000517766 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
CD47-205ENST00000517766 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
CD47-205ENST00000517766 GLMNQ92990 594 aa7.57□□□□□ -1.2
CD47-205ENST00000517766 MYH16Q9H6N6 1097 aa7.57□□□□□ -1.2
CD47-205ENST00000517766 ADGRL3Q9HAR2 1447 aa7.57□□□□□ -1.2
CD47-205ENST00000517766 IL16Q14005 1332 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 RGPD1P0DJD0 1748 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 MARF1Q9Y4F3 1742 aaKnown RBP7.56□□□□□ -1.2
CD47-205ENST00000517766 SOCS7O14512 581 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 PPM1GO15355 546 aaPredicted RBP7.56□□□□□ -1.2
CD47-205ENST00000517766 TLL1O43897 1013 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 IL13P35225 146 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 LYPD8Q6UX82 237 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 PRDM9Q9NQV7 894 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 MAP10Q9P2G4 905 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 SERPINA10Q9UK55 444 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 EMILIN1Q9Y6C2 1016 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 KIF1AQ12756 1690 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 KIF24Q5T7B8 1368 aa7.56□□□□□ -1.2
CD47-205ENST00000517766 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 S1PR4O95977 384 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 VEGFBP49765 207 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 RIPK4P57078 832 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 CALD1Q05682 793 aaKnown RBP7.55□□□□□ -1.2
CD47-205ENST00000517766 LMOD3Q0VAK6 560 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 EXOC6Q8TAG9 804 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 PMFBP1Q8TBY8 1022 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms