RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 COL4A5P29400 1685 aa15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 NBPF26B4DH59 902 aa15.31■□□□□ 0.04
TRAPPC9-203ENST00000517667 NBPF10Q6P3W6 841 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-203ENST00000517667 NBPF15Q8N660 670 aa15.31■□□□□ 0.04
TRAPPC9-203ENST00000517667 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-203ENST00000517667 SCNN1DP51172 638 aa15.3■□□□□ 0.04
TRAPPC9-203ENST00000517667 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
TRAPPC9-203ENST00000517667 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-203ENST00000517667 IBTKQ9P2D0 1353 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC9-203ENST00000517667 ABCC12Q96J65 1359 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 ERVV-1B6SEH8 477 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 CA12O43570 354 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 MAP2K2P36507 400 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 RGS19P49795 217 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 HLFQ16534 295 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 MCM10Q7L590 875 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 NUDCQ9Y266 331 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 KDM3BQ7LBC6 1761 aa15.29■□□□□ 0.04
TRAPPC9-203ENST00000517667 EPS15P42566 896 aa15.28■□□□□ 0.04
TRAPPC9-203ENST00000517667 GRM1Q13255 1194 aa15.28■□□□□ 0.04
TRAPPC9-203ENST00000517667 CYP4F22Q6NT55 531 aa15.28■□□□□ 0.04
TRAPPC9-203ENST00000517667 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.04
TRAPPC9-203ENST00000517667 NIM1KQ8IY84 436 aa15.27■□□□□ 0.04
TRAPPC9-203ENST00000517667 RBM17Q96I25 401 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-203ENST00000517667 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-203ENST00000517667 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
TRAPPC9-203ENST00000517667 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 CST9Q5W186 159 aa15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 KIF6Q6ZMV9 814 aa15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 ADARB2Q9NS39 739 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-203ENST00000517667 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 TRAF5O00463 557 aa15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 FMR1Q06787 632 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 GPRC5DQ9NZD1 345 aa15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
TRAPPC9-203ENST00000517667 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 DLG5Q8TDM6 1919 aa15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 SAPCD2Q86UD0 394 aa15.24■□□□□ 0.03
TRAPPC9-203ENST00000517667 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
TRAPPC9-203ENST00000517667 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
TRAPPC9-203ENST00000517667 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
TRAPPC9-203ENST00000517667 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 AOC2O75106 756 aa15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 CELF2O95319 508 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
TRAPPC9-203ENST00000517667 GPTP24298 496 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 AOC3Q16853 763 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 MCOLN1Q9GZU1 580 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 CASP8AP2Q9UKL3 1982 aa15.21■□□□□ 0.03
TRAPPC9-203ENST00000517667 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.02
TRAPPC9-203ENST00000517667 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 NTSR2O95665 410 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 NEFMP07197 916 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 PARP10Q53GL7 1025 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 NLRP3Q96P20 1036 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 ZBTB3Q9H5J0 574 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 LAMB2P55268 1798 aa15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-203ENST00000517667 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
TRAPPC9-203ENST00000517667 CXCL9Q07325 125 aa15.19■□□□□ 0.02
TRAPPC9-203ENST00000517667 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-203ENST00000517667 RTFDC1Q9BY42 306 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC9-203ENST00000517667 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
TRAPPC9-203ENST00000517667 MYL6BP14649 208 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 NOGQ13253 232 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 TNIP1Q15025 636 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 GLIS2Q9BZE0 524 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-203ENST00000517667 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
TRAPPC9-203ENST00000517667 DGKZQ13574 1117 aa15.17■□□□□ 0.02
TRAPPC9-203ENST00000517667 DPP8Q6V1X1 898 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms