RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.21
YIPF3-217ENST00000514627 CHL1O00533 1208 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
YIPF3-217ENST00000514627 HSP90AB3PQ58FF7 597 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
YIPF3-217ENST00000514627 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
YIPF3-217ENST00000514627 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
YIPF3-217ENST00000514627 FZD9O00144 591 aa16.37■□□□□ 0.21
YIPF3-217ENST00000514627 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
YIPF3-217ENST00000514627 UTP14AQ9BVJ6 771 aaKnown RBP16.37■□□□□ 0.21
YIPF3-217ENST00000514627 TAF1DQ9H5J8 278 aaPredicted RBP16.37■□□□□ 0.21
YIPF3-217ENST00000514627 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
YIPF3-217ENST00000514627 TMX4Q9H1E5 349 aaPredicted RBP16.36■□□□□ 0.21
YIPF3-217ENST00000514627 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
YIPF3-217ENST00000514627 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
YIPF3-217ENST00000514627 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 GPC2Q8N158 579 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 HACL1Q9UJ83 578 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
YIPF3-217ENST00000514627 NUP98P52948 1817 aa16.34■□□□□ 0.21
YIPF3-217ENST00000514627 HOXB7P09629 217 aa16.34■□□□□ 0.21
YIPF3-217ENST00000514627 PNMA8AQ86V59 439 aaPredicted RBP16.34■□□□□ 0.21
YIPF3-217ENST00000514627 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
YIPF3-217ENST00000514627 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
YIPF3-217ENST00000514627 PCNTO95613 3336 aa16.34■□□□□ 0.21
YIPF3-217ENST00000514627 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
YIPF3-217ENST00000514627 ANXA1P04083 346 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 POTEJP0CG39 1038 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 EIF6P56537 245 aaKnown RBP16.33■□□□□ 0.2
YIPF3-217ENST00000514627 TCIRG1Q13488 830 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
YIPF3-217ENST00000514627 BBOX1O75936 387 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 EPHX2P34913 555 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
YIPF3-217ENST00000514627 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
YIPF3-217ENST00000514627 ATP6V0A2Q9Y487 856 aa16.32■□□□□ 0.2
YIPF3-217ENST00000514627 PASKQ96RG2 1323 aa16.31■□□□□ 0.2
YIPF3-217ENST00000514627 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
YIPF3-217ENST00000514627 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
YIPF3-217ENST00000514627 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
YIPF3-217ENST00000514627 ITGBL1O95965 494 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-217ENST00000514627 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
YIPF3-217ENST00000514627 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
YIPF3-217ENST00000514627 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
YIPF3-217ENST00000514627 TRMT112Q9UI30 125 aaKnown RBP16.3■□□□□ 0.2
YIPF3-217ENST00000514627 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
YIPF3-217ENST00000514627 SCN4AP35499 1836 aa16.3■□□□□ 0.2
YIPF3-217ENST00000514627 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 SP8Q8IXZ3 490 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 PLBD2Q8NHP8 589 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
YIPF3-217ENST00000514627 ABCC4O15439 1325 aa16.28■□□□□ 0.2
YIPF3-217ENST00000514627 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
YIPF3-217ENST00000514627 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
YIPF3-217ENST00000514627 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
YIPF3-217ENST00000514627 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
YIPF3-217ENST00000514627 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
YIPF3-217ENST00000514627 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
YIPF3-217ENST00000514627 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
YIPF3-217ENST00000514627 GJA3Q9Y6H8 435 aa16.28■□□□□ 0.2
YIPF3-217ENST00000514627 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
YIPF3-217ENST00000514627 PPIP5K2O43314 1243 aa16.27■□□□□ 0.2
YIPF3-217ENST00000514627 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
YIPF3-217ENST00000514627 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 GRAPQ13588 217 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 MPNDQ8N594 471 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 CHMP4AQ9BY43 222 aa16.26■□□□□ 0.19
YIPF3-217ENST00000514627 MKRN1Q9UHC7 482 aaKnown RBP16.26■□□□□ 0.19
YIPF3-217ENST00000514627 GNAI1P63096 354 aa16.25■□□□□ 0.19
YIPF3-217ENST00000514627 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
YIPF3-217ENST00000514627 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
YIPF3-217ENST00000514627 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
YIPF3-217ENST00000514627 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
YIPF3-217ENST00000514627 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
YIPF3-217ENST00000514627 APAF1O14727 1248 aa16.24■□□□□ 0.19
YIPF3-217ENST00000514627 SCNN1DP51172 638 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms