RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 PCNTO95613 3336 aa33.13■■■□□ 2.89
CLDND1-226ENST00000513287 NTSR2O95665 410 aa33.12■■■□□ 2.89
CLDND1-226ENST00000513287 OLFM4Q6UX06 510 aa33.12■■■□□ 2.89
CLDND1-226ENST00000513287 MYBBP1AQ9BQG0 1328 aaKnown RBP33.11■■■□□ 2.89
CLDND1-226ENST00000513287 SLC10A5Q5PT55 438 aa33.11■■■□□ 2.89
CLDND1-226ENST00000513287 RPGRQ92834 1020 aaKnown RBP33.11■■■□□ 2.89
CLDND1-226ENST00000513287 RNF123Q5XPI4 1314 aa33.1■■■□□ 2.89
CLDND1-226ENST00000513287 GPTP24298 496 aa33.1■■■□□ 2.89
CLDND1-226ENST00000513287 RBM17Q96I25 401 aaKnown RBP33.09■■■□□ 2.89
CLDND1-226ENST00000513287 POTEIP0CG38 1075 aa33.08■■■□□ 2.89
CLDND1-226ENST00000513287 POTEJP0CG39 1038 aa33.08■■■□□ 2.89
CLDND1-226ENST00000513287 GPC2Q8N158 579 aa33.08■■■□□ 2.89
CLDND1-226ENST00000513287 PASKQ96RG2 1323 aa33.07■■■□□ 2.88
CLDND1-226ENST00000513287 ZNF541Q9H0D2 1346 aa33.07■■■□□ 2.88
CLDND1-226ENST00000513287 JDP2Q8WYK2 163 aa33.07■■■□□ 2.88
CLDND1-226ENST00000513287 HACL1Q9UJ83 578 aa33.07■■■□□ 2.88
CLDND1-226ENST00000513287 CHL1O00533 1208 aa33.06■■■□□ 2.88
CLDND1-226ENST00000513287 EIF2S2P20042 333 aaKnown RBP33.06■■■□□ 2.88
CLDND1-226ENST00000513287 PNMA8AQ86V59 439 aaPredicted RBP33.06■■■□□ 2.88
CLDND1-226ENST00000513287 NLRP3Q96P20 1036 aa33.06■■■□□ 2.88
CLDND1-226ENST00000513287 HSP90AB3PQ58FF7 597 aa33.05■■■□□ 2.88
CLDND1-226ENST00000513287 VPS33BQ9H267 617 aa33.05■■■□□ 2.88
CLDND1-226ENST00000513287 UTP14AQ9BVJ6 771 aaKnown RBP33.04■■■□□ 2.88
CLDND1-226ENST00000513287 ADAMTSL1Q8N6G6 1762 aa33.04■■■□□ 2.88
CLDND1-226ENST00000513287 RUNDC1Q96C34 613 aa33.03■■■□□ 2.88
CLDND1-226ENST00000513287 DDX10Q13206 875 aaKnown RBP33.02■■■□□ 2.88
CLDND1-226ENST00000513287 DDX21Q9NR30 783 aaKnown RBP eCLIP33.02■■■□□ 2.88
CLDND1-226ENST00000513287 ITGBL1O95965 494 aaPredicted RBP33.01■■■□□ 2.87
CLDND1-226ENST00000513287 EPHX2P34913 555 aa33.01■■■□□ 2.87
CLDND1-226ENST00000513287 PROSER3Q2NL68 480 aa33.01■■■□□ 2.87
CLDND1-226ENST00000513287 ANKRD36CQ5JPF3 1778 aa33.01■■■□□ 2.87
CLDND1-226ENST00000513287 PPEF1O14829 653 aaPredicted RBP33■■■□□ 2.87
CLDND1-226ENST00000513287 COPS6Q7L5N1 327 aa33■■■□□ 2.87
CLDND1-226ENST00000513287 HOXB7P09629 217 aa32.99■■■□□ 2.87
CLDND1-226ENST00000513287 EIF6P56537 245 aaKnown RBP32.99■■■□□ 2.87
CLDND1-226ENST00000513287 TRIM35Q9UPQ4 493 aa32.99■■■□□ 2.87
CLDND1-226ENST00000513287 COL13A1Q5TAT6 717 aaPredicted RBP32.98■■■□□ 2.87
CLDND1-226ENST00000513287 ATP6V0A2Q9Y487 856 aa32.98■■■□□ 2.87
CLDND1-226ENST00000513287 TCIRG1Q13488 830 aa32.97■■■□□ 2.87
CLDND1-226ENST00000513287 C3orf67Q6ZVT6 689 aa32.97■■■□□ 2.87
CLDND1-226ENST00000513287 TMX4Q9H1E5 349 aaPredicted RBP32.97■■■□□ 2.87
CLDND1-226ENST00000513287 BBOX1O75936 387 aa32.96■■■□□ 2.87
CLDND1-226ENST00000513287 HSPA1AP0DMV8 641 aaKnown RBP32.96■■■□□ 2.87
CLDND1-226ENST00000513287 HSPA1BP0DMV9 641 aaKnown RBP32.96■■■□□ 2.87
CLDND1-226ENST00000513287 NLRP10Q86W26 655 aa32.96■■■□□ 2.87
CLDND1-226ENST00000513287 COL4A5P29400 1685 aa32.95■■■□□ 2.87
CLDND1-226ENST00000513287 ANXA1P04083 346 aa32.95■■■□□ 2.87
CLDND1-226ENST00000513287 WDR43Q15061 677 aaKnown RBP eCLIP32.95■■■□□ 2.87
CLDND1-226ENST00000513287 XAGE3Q8WTP9 111 aa32.95■■■□□ 2.87
CLDND1-226ENST00000513287 CNTNAP1P78357 1384 aa32.95■■■□□ 2.86
CLDND1-226ENST00000513287 TMEM88BA6NKF7 163 aa32.94■■■□□ 2.86
CLDND1-226ENST00000513287 EAPPQ56P03 285 aaPredicted RBP32.94■■■□□ 2.86
CLDND1-226ENST00000513287 LARGE2Q8N3Y3 721 aa32.94■■■□□ 2.86
CLDND1-226ENST00000513287 RTFDC1Q9BY42 306 aaPredicted RBP32.94■■■□□ 2.86
CLDND1-226ENST00000513287 NEUROD2Q15784 382 aa32.93■■■□□ 2.86
CLDND1-226ENST00000513287 CCDC146Q8IYE0 955 aa32.93■■■□□ 2.86
CLDND1-226ENST00000513287 SP8Q8IXZ3 490 aa32.92■■■□□ 2.86
CLDND1-226ENST00000513287 SUPT20HQ8NEM7 779 aa32.92■■■□□ 2.86
CLDND1-226ENST00000513287 ADAMTS8Q9UP79 889 aa32.92■■■□□ 2.86
CLDND1-226ENST00000513287 CFAP44Q96MT7 982 aa32.91■■■□□ 2.86
CLDND1-226ENST00000513287 CLEC11AQ9Y240 323 aa32.91■■■□□ 2.86
CLDND1-226ENST00000513287 ABCC4O15439 1325 aa32.91■■■□□ 2.86
CLDND1-226ENST00000513287 AIMP1Q12904 312 aaKnown RBP32.9■■■□□ 2.86
CLDND1-226ENST00000513287 CNTROBQ8N137 903 aa32.9■■■□□ 2.86
CLDND1-226ENST00000513287 MKRN1Q9UHC7 482 aaKnown RBP32.9■■■□□ 2.86
CLDND1-226ENST00000513287 SH3TC1Q8TE82 1336 aa32.9■■■□□ 2.86
CLDND1-226ENST00000513287 LAMB2P55268 1798 aa32.9■■■□□ 2.86
CLDND1-226ENST00000513287 LMOD1P29536 600 aaPredicted RBP32.89■■■□□ 2.86
CLDND1-226ENST00000513287 NIM1KQ8IY84 436 aa32.89■■■□□ 2.86
CLDND1-226ENST00000513287 PLBD2Q8NHP8 589 aa32.89■■■□□ 2.86
CLDND1-226ENST00000513287 DBF4Q9UBU7 674 aaPredicted RBP32.89■■■□□ 2.86
CLDND1-226ENST00000513287 TMC4Q7Z404 712 aa32.88■■■□□ 2.85
CLDND1-226ENST00000513287 TRMT112Q9UI30 125 aaKnown RBP32.88■■■□□ 2.85
CLDND1-226ENST00000513287 SCNN1DP51172 638 aa32.87■■■□□ 2.85
CLDND1-226ENST00000513287 KRT24Q2M2I5 525 aa32.87■■■□□ 2.85
CLDND1-226ENST00000513287 NECTIN2Q92692 538 aa32.87■■■□□ 2.85
CLDND1-226ENST00000513287 CHPF2Q9P2E5 772 aa32.87■■■□□ 2.85
CLDND1-226ENST00000513287 GJA3Q9Y6H8 435 aa32.87■■■□□ 2.85
CLDND1-226ENST00000513287 PPIP5K2O43314 1243 aa32.86■■■□□ 2.85
CLDND1-226ENST00000513287 HDGFL1Q5TGJ6 251 aa32.86■■■□□ 2.85
CLDND1-226ENST00000513287 ANKRD13DQ6ZTN6 518 aa32.86■■■□□ 2.85
CLDND1-226ENST00000513287 USP50Q70EL3 339 aaPredicted RBP32.86■■■□□ 2.85
CLDND1-226ENST00000513287 PRKRIP1Q9H875 184 aaPredicted RBP32.86■■■□□ 2.85
CLDND1-226ENST00000513287 LTBP1Q14766 1721 aa32.85■■■□□ 2.85
CLDND1-226ENST00000513287 DDX46Q7L014 1031 aaKnown RBP32.85■■■□□ 2.85
CLDND1-226ENST00000513287 TCERG1O14776 1098 aaKnown RBP32.84■■■□□ 2.85
CLDND1-226ENST00000513287 HCLS1P14317 486 aaPredicted RBP32.84■■■□□ 2.85
CLDND1-226ENST00000513287 GRAPQ13588 217 aa32.84■■■□□ 2.85
CLDND1-226ENST00000513287 GRAPLQ8TC17 118 aaPredicted RBP32.84■■■□□ 2.85
CLDND1-226ENST00000513287 ISCA1Q9BUE6 129 aa32.84■■■□□ 2.85
CLDND1-226ENST00000513287 HYPKQ9NX55 129 aa32.84■■■□□ 2.85
CLDND1-226ENST00000513287 ZNRF3Q9ULT6 936 aa32.84■■■□□ 2.85
CLDND1-226ENST00000513287 LAS1LQ9Y4W2 734 aaKnown RBP32.84■■■□□ 2.85
CLDND1-226ENST00000513287 ZNF853P0CG23 659 aa32.83■■■□□ 2.85
CLDND1-226ENST00000513287 TRIM28Q13263 835 aaKnown RBP32.83■■■□□ 2.85
CLDND1-226ENST00000513287 MAP1SQ66K74 1059 aaPredicted RBP32.83■■■□□ 2.85
CLDND1-226ENST00000513287 TNS4Q8IZW8 715 aa32.83■■■□□ 2.85
CLDND1-226ENST00000513287 MPNDQ8N594 471 aa32.83■■■□□ 2.85
CLDND1-226ENST00000513287 RASSF10A6NK89 507 aa32.82■■■□□ 2.84
CLDND1-226ENST00000513287 EPS15P42566 896 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms