RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 USP48Q86UV5 1035 aa17.59■□□□□ 0.41
DDR1-271ENST00000513240 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
DDR1-271ENST00000513240 G3BP1Q13283 466 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDR1-271ENST00000513240 PDIA6Q15084 440 aa17.59■□□□□ 0.41
DDR1-271ENST00000513240 GRM8O00222 908 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 RAB11FIP3O75154 756 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 PTMSP20962 102 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 ZNF790Q6PG37 636 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 UBE3BQ7Z3V4 1068 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 MYRIPQ8NFW9 859 aa17.58■□□□□ 0.41
DDR1-271ENST00000513240 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.4
DDR1-271ENST00000513240 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
DDR1-271ENST00000513240 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
DDR1-271ENST00000513240 NMIQ13287 307 aaPredicted RBP17.58■□□□□ 0.4
DDR1-271ENST00000513240 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
DDR1-271ENST00000513240 VPS37CA5D8V6 355 aaPredicted RBP17.57■□□□□ 0.4
DDR1-271ENST00000513240 BRD1O95696 1058 aa17.57■□□□□ 0.4
DDR1-271ENST00000513240 DNAJC2Q99543 621 aaKnown RBP17.57■□□□□ 0.4
DDR1-271ENST00000513240 LRRC2Q9BYS8 371 aa17.57■□□□□ 0.4
DDR1-271ENST00000513240 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
DDR1-271ENST00000513240 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
DDR1-271ENST00000513240 ZNF445P59923 1031 aa17.56■□□□□ 0.4
DDR1-271ENST00000513240 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
DDR1-271ENST00000513240 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
DDR1-271ENST00000513240 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
DDR1-271ENST00000513240 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
DDR1-271ENST00000513240 ZNF589Q86UQ0 364 aaPredicted RBP17.55■□□□□ 0.4
DDR1-271ENST00000513240 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
DDR1-271ENST00000513240 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
DDR1-271ENST00000513240 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 RAD50Q92878 1312 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 CYP27B1O15528 508 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 ATF3P18847 181 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 SYT1P21579 422 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 CUL4AQ13619 759 aa17.54■□□□□ 0.4
DDR1-271ENST00000513240 ZNF771Q7L3S4 317 aaPredicted RBP17.54■□□□□ 0.4
DDR1-271ENST00000513240 RBM8AQ9Y5S9 174 aaKnown RBP17.54■□□□□ 0.4
DDR1-271ENST00000513240 TFCP2Q12800 502 aa17.53■□□□□ 0.4
DDR1-271ENST00000513240 SMC3Q9UQE7 1217 aa17.53■□□□□ 0.4
DDR1-271ENST00000513240 ERBB3P21860 1342 aa17.53■□□□□ 0.4
DDR1-271ENST00000513240 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
DDR1-271ENST00000513240 C17orf53Q8N3J3 647 aaPredicted RBP17.53■□□□□ 0.4
DDR1-271ENST00000513240 NEUROD6Q96NK8 337 aa17.53■□□□□ 0.4
DDR1-271ENST00000513240 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDR1-271ENST00000513240 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
DDR1-271ENST00000513240 GJB2P29033 226 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
DDR1-271ENST00000513240 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
DDR1-271ENST00000513240 LINS1Q8NG48 757 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 ZNF594Q96JF6 807 aaPredicted RBP17.52■□□□□ 0.4
DDR1-271ENST00000513240 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 STRN4Q9NRL3 753 aa17.52■□□□□ 0.4
DDR1-271ENST00000513240 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.39
DDR1-271ENST00000513240 A1BGP04217 495 aa17.52■□□□□ 0.39
DDR1-271ENST00000513240 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.39
DDR1-271ENST00000513240 MCM5P33992 734 aa17.52■□□□□ 0.39
DDR1-271ENST00000513240 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.39
DDR1-271ENST00000513240 HYPKQ9NX55 129 aa17.52■□□□□ 0.39
DDR1-271ENST00000513240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.52■□□□□ 0.39
DDR1-271ENST00000513240 ME3Q16798 604 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 ANKRD13DQ6ZTN6 518 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 A0A087WZG4 1122 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 A0A0G2JLW4 131 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 A0A0G2JS52 829 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 PHKG2P15735 406 aa17.51■□□□□ 0.39
DDR1-271ENST00000513240 TIMM10P62072 90 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 GCKRQ14397 625 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 LIMCH1Q9UPQ0 1083 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
DDR1-271ENST00000513240 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
DDR1-271ENST00000513240 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 TTC14Q96N46 770 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 DBNDD2Q9BQY9 259 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 CHMP4AQ9BY43 222 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 TFIP11Q9UBB9 837 aaKnown RBP17.5■□□□□ 0.39
DDR1-271ENST00000513240 TPCN1Q9ULQ1 816 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 NPHP3Q7Z494 1330 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 CABP4P57796 275 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 LTN1O94822 1766 aa17.5■□□□□ 0.39
DDR1-271ENST00000513240 ANAPC15P60006 121 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 ST3GAL1Q11201 340 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 STX6O43752 255 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 HSP90AB4PQ58FF6 505 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 PDCL2Q8N4E4 241 aa17.49■□□□□ 0.39
DDR1-271ENST00000513240 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 NFAT5O94916 1531 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 RPAP1Q9BWH6 1393 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms