RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 HSP90AA1P07900 732 aaKnown RBP7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 PRR29P0C7W0 189 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 TDO2P48775 406 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 MMP14P50281 582 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 STAC3Q96MF2 364 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 LUZP4Q9P127 313 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 ANAPC4Q9UJX5 808 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 HDAC5Q9UQL6 1122 aa7.79□□□□□ -1.16
TRAPPC11-209ENST00000512476 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 CFAP99D6REC4 459 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 GPR182O15218 404 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 FAM160A1Q05DH4 1040 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 PLEKHM2Q8IWE5 1019 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 OTUD6BQ8N6M0 293 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 UBR7Q8N806 425 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 CCDC89Q8N998 374 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 VPS37AQ8NEZ2 397 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 HNRNPLLQ8WVV9 542 aaKnown RBP7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 PPP2R3BQ9Y5P8 575 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 CFTRP13569 1480 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 MAP3K13O43283 966 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 ERICH6BQ5W0A0 696 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 IL31Q6EBC2 164 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 ZNF654Q8IZM8 581 aa7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 EVLQ9UI08 416 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC11-209ENST00000512476 EPB42P16452 691 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 MYO1HQ8N1T3 1032 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 SEZ6LQ9BYH1 1024 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 RBCK1Q9BYM8 510 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 RNF39Q9H2S5 420 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 NOL7Q9UMY1 257 aaKnown RBP7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 IGF1RP08069 1367 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 RAPGEF3O95398 923 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 ANKS3Q6ZW76 656 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 NKX2-3Q8TAU0 364 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 MYCBPQ99417 103 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 NELL2Q99435 816 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 CCDC87Q9NVE4 849 aa7.77□□□□□ -1.17
TRAPPC11-209ENST00000512476 CCDC163A0A0D9SF12 145 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 C2orf72A6NCS6 295 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 NEK3P51956 506 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 GEMIN4P57678 1058 aaKnown RBP7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 EN1Q05925 392 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 HSCBQ8IWL3 235 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 SPICE1Q8N0Z3 855 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 TIFAQ96CG3 184 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 NOB1Q9ULX3 412 aaKnown RBP7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 MYL3P08590 195 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 ESCO1Q5FWF5 840 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 APPBP2Q92624 585 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
TRAPPC11-209ENST00000512476 KLF4O43474 513 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 FKBP5Q13451 457 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 NBPF20Q3BBV1 942 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 COPRSQ9NQ92 184 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 KATNA1O75449 491 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 LMBRD2Q68DH5 695 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 ZNF513Q8N8E2 541 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 KIAA1958Q8N8K9 716 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 ZBTB3Q9H5J0 574 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 POLG2Q9UHN1 485 aa7.75□□□□□ -1.17
TRAPPC11-209ENST00000512476 AKAP10O43572 662 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 OATP04181 439 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 JPH3Q8WXH2 748 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 RELTQ969Z4 430 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 RETREG1Q9H6L5 497 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 WRNQ14191 1432 aaPredicted RBP eCLIP7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 PRDM2Q13029 1718 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 A6NCN8 305 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 NBNO60934 754 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 CTHP32929 405 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 ST13P50502 369 aaKnown RBP7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 TEX19Q8NA77 164 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 CWC25Q9NXE8 425 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 C9orf78Q9NZ63 289 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
TRAPPC11-209ENST00000512476 BICDL2A1A5D9 508 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 EVI5O60447 810 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 MPSTP25325 297 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 SERPINB3P29508 390 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CNGA1P29973 690 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 RAB33AQ14088 237 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 ALKBH2Q6NS38 261 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 TTC30AQ86WT1 665 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms