RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 SYCE3A1L190 88 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 MTMR7Q9Y216 660 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 EPS15P42566 896 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
CPNE4-209ENST00000512055 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE4-209ENST00000512055 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
CPNE4-209ENST00000512055 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-209ENST00000512055 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 METTL24Q5JXM2 366 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 KSR2Q6VAB6 950 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 RAD21O60216 631 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-209ENST00000512055 ESYT1Q9BSJ8 1104 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 CCDC175P0C221 793 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 KRT85P78386 507 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
CPNE4-209ENST00000512055 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
CPNE4-209ENST00000512055 GRM8O00222 908 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 IFIT1P09914 478 aaKnown RBP12.61□□□□□ -0.39
CPNE4-209ENST00000512055 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPNE4-209ENST00000512055 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 ARAP3Q8WWN8 1544 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
CPNE4-209ENST00000512055 SEPT11Q9NVA2 429 aaKnown RBP12.61□□□□□ -0.39
CPNE4-209ENST00000512055 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
CPNE4-209ENST00000512055 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 NPHP3Q7Z494 1330 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 KRT32Q14532 448 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
CPNE4-209ENST00000512055 DDX17Q92841 729 aaKnown RBP12.6□□□□□ -0.39
CPNE4-209ENST00000512055 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 ROBO2Q9HCK4 1378 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 E9PCH4 1651 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
CPNE4-209ENST00000512055 RNF17Q9BXT8 1623 aaKnown RBP12.6□□□□□ -0.39
CPNE4-209ENST00000512055 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 SIRT1Q96EB6 747 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 DHX16O60231 1041 aaKnown RBP12.59□□□□□ -0.39
CPNE4-209ENST00000512055 USP19O94966 1318 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 GOLIM4O00461 696 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 KINO60870 393 aaKnown RBP12.59□□□□□ -0.39
CPNE4-209ENST00000512055 SRRTQ9BXP5 876 aaKnown RBP12.59□□□□□ -0.39
CPNE4-209ENST00000512055 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
CPNE4-209ENST00000512055 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
CPNE4-209ENST00000512055 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
CPNE4-209ENST00000512055 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-209ENST00000512055 SART3Q15020 963 aaKnown RBP12.58□□□□□ -0.4
CPNE4-209ENST00000512055 STK38Q15208 465 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 KIAA1328Q86T90 577 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 SNX21Q969T3 373 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-209ENST00000512055 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
CPNE4-209ENST00000512055 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 ME1P48163 572 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 DDX46Q7L014 1031 aaKnown RBP12.58□□□□□ -0.4
CPNE4-209ENST00000512055 PPM1EQ8WY54 764 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 CCDC113Q9H0I3 377 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.4
CPNE4-209ENST00000512055 SETSIPP0DME0 302 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 SERPINA10Q9UK55 444 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 SOS1Q07889 1333 aaPredicted RBP12.57□□□□□ -0.4
CPNE4-209ENST00000512055 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 USP26Q9BXU7 913 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
CPNE4-209ENST00000512055 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 LMAN1P49257 510 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 ABCC4O15439 1325 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 BMS1Q14692 1282 aaKnown RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 FAM135BQ49AJ0 1406 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 ZNF396Q96N95 335 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms